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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ttlB_

Fold library idPDB HeaderMoleculeTitle
c3ttlB_PDB header: transport proteinChain: B: PDB Molecule: polyamine transport protein;PDBTitle: crystal structure of apo-spue


Added to library: Sat Mar 31 12:34:48 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQK
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Known secondary structure (DSSP)
TT
S
TT


SSS



S

BTTTT
B

 .........80.........90.........100.........110.........120.........130.........140
Sequence LDKSKLPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKK
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Known secondary structure (DSSP)

GGG
GGGGGS
TTTSGGG
STT



ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence LAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF
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Known secondary structure (DSSP) TTT

S
TS
TT


GGG


SSTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYV
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Known secondary structure (DSSP) TS




TT


BTT


TTS
 .........290.........300.........310.........320.........330.....
Sequence GYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIK
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Known secondary structure (DSSP)

B
S
GGGGGGS
TTTTS
TTTS

TT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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