Fold library entry viewer: c3topA_

Added to library: Sat Nov 26 19:58:42 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	E	E	K	I	D	C	Y	P	D	E	N	G	A	S	A	E	N	C	T	A	R	G	C	I	W	E	A	S	N	S	S	G	V	P	F	C	Y	F	V	N	D	L	Y	S	V	S	D	V	Q	Y	N	S	H	G	A	T	A	D	I	S	L	K	S	S	V	Y	A	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			B	S				S	S									T	T	T							S	S	T	T			S				S	S		S										S	S									S						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	P	S	T	P	V	N	P	L	R	L	D	V	T	Y	H	K	N	E	M	L	Q	F	K	I	Y	D	P	N	K	N	R	Y	E	V	P	V	P	L	N	I	P	S	M	P	S	S	T	P	E	G	Q	L	Y	D	V	L	I	K	K	N	P	F	G	I	E	I	R	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S		B		S	S									S	S	S									S	S	S													S	S					T	T	T									T	T	T	T							T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	T	G	T	I	I	W	D	S	Q	L	L	G	F	T	F	S	D	M	F	I	R	I	S	T	R	L	P	S	K	Y	L	Y	G	F	G	E	T	E	H	R	S	Y	R	R	D	L	E	W	H	T	W	G	M	F	S	R	D	Q	P	P	G	Y	K	K	N	S	Y	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S									S	S						T	T									S	S	S						S	S	S			S	S	S	B				S	S						S						S		T	T				S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	P	Y	Y	M	G	L	E	E	D	G	S	A	H	G	V	L	L	L	N	S	N	A	M	D	V	T	F	Q	P	L	P	A	L	T	Y	R	T	T	G	G	V	L	D	F	Y	V	F	L	G	P	T	P	E	L	V	T	Q	Q	Y	T	E	L	I	G	R	P	V	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S											S	S							T	T	T							S	S	S										S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	Y	W	S	L	G	F	Q	L	C	R	Y	G	Y	Q	N	D	S	E	I	A	S	L	Y	D	E	M	V	A	A	Q	I	P	Y	D	V	Q	Y	S	D	I	D	Y	M	E	R	Q	L	D	F	T	L	S	P	K	F	A	G	F	P	A	L	I	N	R	M	K	A	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	G	S						T	T			S															T										G	G	G	S	S	T	T		T	T				G	G	G	T	T												T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	M	R	V	I	L	I	L	D	P	A	I	S	G	N	E	T	Q	P	Y	P	A	F	T	R	G	V	E	D	D	V	F	I	K	Y	P	N	D	G	D	I	V	W	G	K	V	W	P	D	F	P	D	V	V	V	N	G	S	L	D	W	D	S	Q	V	E	L	Y	R	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S								S												T		B		B		S	S	S			B										S	S					T	T	S									T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	A	F	P	D	F	F	R	N	S	T	A	K	W	W	K	R	E	I	E	E	L	Y	N	N	P	Q	N	P	E	R	S	L	K	F	D	G	M	W	I	D	M	N	E	P	S	S	F	V	N	G	A	V	S	P	G	C	R	D	A	S	L	N	H	P	P	Y	M	P	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B		T	T	S																S		S	S		G	G	G					S						S	T	T	T			S	S	S	S	S	S	S	S					T	T	T	S	S		S	S			S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	E	S	R	D	R	G	L	S	S	K	T	L	C	M	E	S	Q	Q	I	L	P	D	G	S	L	V	Q	H	Y	N	V	H	N	L	Y	G	W	S	Q	T	R	P	T	Y	E	A	V	Q	E	V	T	G	Q	R	G	V	V	I	T	R	S	T	F	P	S	S	G	R	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	G	G	G	T	T	T	T	T	S			T	T						S	S	S									G	G	G																		S	S							S	S			T	T	G	G	G	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	G	H	W	L	G	D	N	T	A	A	W	D	Q	L	K	K	S	I	I	G	M	M	E	F	S	L	F	G	I	S	Y	T	G	A	D	I	C	G	F	F	Q	D	A	E	Y	E	M	C	V	R	W	M	Q	L	G	A	F	Y	P	F	S	R	N	H	N	T	I	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B	S	S	T																	T			S				B	T	T		S	B	S															T	T	S	S	S							S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	R	R	Q	D	P	V	S	W	D	V	A	F	V	N	I	S	R	T	V	L	Q	T	R	Y	T	L	L	P	Y	L	Y	T	L	M	H	K	A	H	T	E	G	V	T	V	V	R	P	L	L	H	E	F	V	S	D	Q	V	T	W	D	I	D	S	Q	F	L	L	G	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	G	G	G	S																																				S				G	G	G	T		T	T		T	T	T	T	T			S	S				T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	F	L	V	S	P	V	L	E	R	N	A	R	N	V	T	A	Y	F	P	R	A	R	W	Y	D	Y	Y	T	G	V	D	I	N	A	R	G	E	W	K	T	L	P	A	P	L	D	H	I	N	L	H	V	R	G	G	Y	I	L	P	W	Q	E	P	A	L	N	T	H	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S										S	S					T	T	T			B				S	S									T	T								T											S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	R	Q	K	F	M	G	F	K	I	A	L	D	D	E	G	T	A	G	G	W	L	F	W	D	D	G	Q	S	I	D	T	Y	G	K	G	L	Y	Y	L	A	S	F	S	A	S	Q	N	T	M	Q	S	H	I	I	F	N	N	Y	I	T	G	T	N	P	L	K	L	G	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S									B	T	T	B											S	S	S	T	T	T	G	G	G	S											S	S										S	S			S	S	S			B
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890
Sequence	E	I	W	G	V	G	S	V	P	V	T	S	V	S	I	S	V	S	G	M	V	I	T	P	S	F	N	N	D	P	T	T	Q	V	L	S	I	D	V	T	D	R	N	I	S	L	H	N	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S				S						S	S	S										S	S	S								T	T	S			B	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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