PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3tjzB_

Fold library id	PDB Header	Molecule	Title
c3tjzB_	PDB header: protein transport/protein binding	Chain: B: PDB Molecule: coatomer subunit gamma;	PDBTitle: crystal structure of arf1 bound to the gamma/zeta-cop core complex

Links to external resources
Added to library: Sat Feb 25 11:30:10 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q H L E K S A V L Q E A R V F N E T P I N P R K C A H I L T K I L Y L I N Q G E H L G T T E A T E A F F A M T K L F Q S N D P T L R R M C Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T S S S
T
G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L T I K E M S C I A E D V I I V T S S L T K D M T G K E D S Y R G P A V R A L C Q I T D S T M L Q A I E R Y M K Q A I V D K V P S V S S S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S S
G G G G S S
T T T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L V S S L H L L K C S F D V V K R W V N E A Q E A A S S D N I M V Q Y H A L G L L Y H V R K N D R L A V S K M I S K F T R H G L K S P F A Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T T T
S S T T
S S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . .

Sequence C M M I R V A S R Q S C L R N K H E M V V Y E A A S A I V N A V S V L Q L F C S S P K A A L R Y A A V R T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S T
T S S S S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	H	L	E	K	S	A	V	L	Q	E	A	R	V	F	N	E	T	P	I	N	P	R	K	C	A	H	I	L	T	K	I	L	Y	L	I	N	Q	G	E	H	L	G	T	T	E	A	T	E	A	F	F	A	M	T	K	L	F	Q	S	N	D	P	T	L	R	R	M	C	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												G	G	G	T	T	S	S	S																				T																	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	T	I	K	E	M	S	C	I	A	E	D	V	I	I	V	T	S	S	L	T	K	D	M	T	G	K	E	D	S	Y	R	G	P	A	V	R	A	L	C	Q	I	T	D	S	T	M	L	Q	A	I	E	R	Y	M	K	Q	A	I	V	D	K	V	P	S	V	S	S	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	S	S		G	G	G	G										S	S																		T	T	T													T		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	V	S	S	L	H	L	L	K	C	S	F	D	V	V	K	R	W	V	N	E	A	Q	E	A	A	S	S	D	N	I	M	V	Q	Y	H	A	L	G	L	L	Y	H	V	R	K	N	D	R	L	A	V	S	K	M	I	S	K	F	T	R	H	G	L	K	S	P	F	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T							T	T								T	T		S	S																T	T														S	S			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Sequence	C	M	M	I	R	V	A	S	R	Q	S	C	L	R	N	K	H	E	M	V	V	Y	E	A	A	S	A	I	V	N	A	V	S	V	L	Q	L	F	C	S	S	P	K	A	A	L	R	Y	A	A	V	R	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T								S	S												T					T							S	S	S	S	S	S