PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3tjrA_

Fold library id	PDB Header	Molecule	Title
c3tjrA_	PDB header: oxidoreductase	Chain: A: PDB Molecule: short chain dehydrogenase;	PDBTitle: crystal structure of a rv0851c ortholog short chain dehydrogenase from2 mycobacterium paratuberculosis

Links to external resources
Added to library: Sat Sep 3 10:21:07 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G F L S G F D G R A A V V T G G A S G I G L A T A T E F A R R G A R L V L S D V D Q P A L E Q A V N G L R G Q G F D A H G V V C D V R H L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T T S T T
S
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E M V R L A D E A F R L L G G V D V V F S N A G I V V A G P L A Q M N H D D W R W V I D I D L W G S I H A V E A F L P R L L E Q G T G G H I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S
B
G G G
T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A F T A S F A G L V P N A G L G T Y G V A K Y G V V G L A E T L A R E V K P N G I G V S V L C P M V V E T K L V S N S E R I R S V S A D D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T S
T T B G G G T
S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . .

Sequence A R L T A D A I L A N R L Y I L P H A A A R E S I R R R F E R I D R T F D E Q A A E G W T H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	F	L	S	G	F	D	G	R	A	A	V	V	T	G	G	A	S	G	I	G	L	A	T	A	T	E	F	A	R	R	G	A	R	L	V	L	S	D	V	D	Q	P	A	L	E	Q	A	V	N	G	L	R	G	Q	G	F	D	A	H	G	V	V	C	D	V	R	H	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	T	T							T	T	T	S													T	T								S															T	T										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	M	V	R	L	A	D	E	A	F	R	L	L	G	G	V	D	V	V	F	S	N	A	G	I	V	V	A	G	P	L	A	Q	M	N	H	D	D	W	R	W	V	I	D	I	D	L	W	G	S	I	H	A	V	E	A	F	L	P	R	L	L	E	Q	G	T	G	G	H	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S		S												B		G	G	G														T																			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	F	T	A	S	F	A	G	L	V	P	N	A	G	L	G	T	Y	G	V	A	K	Y	G	V	V	G	L	A	E	T	L	A	R	E	V	K	P	N	G	I	G	V	S	V	L	C	P	M	V	V	E	T	K	L	V	S	N	S	E	R	I	R	S	V	S	A	D	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	T	S			T	T	B																						G	G	G	T									S				S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Sequence	A	R	L	T	A	D	A	I	L	A	N	R	L	Y	I	L	P	H	A	A	A	R	E	S	I	R	R	R	F	E	R	I	D	R	T	F	D	E	Q	A	A	E	G	W	T	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T		S						T	T																						T	T