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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3tbkA_

Fold library idPDB HeaderMoleculeTitle
c3tbkA_PDB header: hydrolaseChain: A: PDB Molecule: rig-i helicase domain;PDBTitle: mouse rig-i atpase domain


Added to library: Sat Oct 29 19:17:27 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SPLKPRNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEHHLKKFPCGQKGKVVFFANQIPVYEQQAT
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Known secondary structure (DSSP)





TT



TTS
T

SS




SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VFSRYFERLGYNIASISGATSDSVSVQHIIEDNDIIILTPQILVNNLNNGAIPSLSVFTLXIFDECHNTS
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Known secondary structure (DSSP) TTT


TTTGGGS

S
TSSS

GGG
STTGGG
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence KNHPYNQIXFRYLDHKLGESRDPLPQVVGLTASVGVGDAKTAEEAXQHICKLCAALDASVIATVRDNVAE
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Known secondary structure (DSSP) TT
TSS

S


S



TT

STT
S


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LEQVVYKPQKISRKVASRTSNTFKCIISQLXKETEKLAKDVSEELGKLFQIQNREFGTQKYEQWIVGVHK
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Known secondary structure (DSSP) TT








S

TS
GGGG

S

SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ACSVFQXADKEEESRVCKALFLYTSHLRKYNDALIISEDAQXTDALNYLKAFFHDVRETERELTRRFEEK
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Known secondary structure (DSSP) T


SSS


TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LEELEKVSRDPSNENPKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKPGILTG
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Known secondary structure (DSSP)
GGG


TT


SS
GGGTT




 .........430.........440.........450.........460.........470.........480.........490
Sequence DNNILIATSVADEGIDIAECNLVILYEYVGNVIKXIQTRGRGRARDSKCFLLTSSADVIEKEKANXIKEK
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Known secondary structure (DSSP)

S


TT

TTS
SS

SS



SS


TTTS
S
 .........500.........510.........520....
Sequence IXNESILRLQTWDEXKFGKTVHRIQVNEKLLRDS
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Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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