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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3tb6B_

Fold library idPDB HeaderMoleculeTitle
c3tb6B_PDB header: dna binding proteinChain: B: PDB Molecule: arabinose metabolism transcriptional repressor;PDBTitle: structure of the effector-binding domain of arabinose repressor arar2 from bacillus subtilis


Added to library: Sat Jan 28 18:10:26 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQ
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Known secondary structure (DSSP)
S
SSSTTTT

TT
SS

S

SSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TPNIGYYLNLEKNGIPFAMINASYAELAAPSFTLDDVKGGMMAAEHLLSLGHTHMMGIFKADDTQGVKRM
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Known secondary structure (DSSP)
TTTT

SS

TT

S

TT

SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NGFIQAHRERELFPSPDMIVTFTTEEKESKLLEKVKATLEKNSKHMPTAILCYNDEIALKVIDMLREMDL
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Known secondary structure (DSSP) TT



GGG
TTTGGG

SSSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KVPEDMSIVGYDDSHFAQISEVKLTSVKHPKSVLGKAAAKYVIDCLEHKKPKQEDVIFEPELIIRQSARK
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Known secondary structure (DSSP)
TTTT

SB

TSSS


B

TTT




S





SSS

 ...
Sequence LNE
Predicted secondary structure


SS confidence


Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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