Fold library entry viewer: c3t5oA_

Added to library: Sat Feb 4 18:23:39 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	C	F	C	D	H	Y	A	W	T	Q	W	T	S	C	S	K	T	C	N	S	G	T	Q	S	R	H	R	Q	I	V	V	D	K	Y	Y	Q	E	N	F	C	E	Q	I	C	S	K	Q	E	T	R	E	C	N	W	Q	R	C	P	I	N	C	L	L	G	D	F	G	P	W	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	S		B							S		S	S	S								B											T	T																S				B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	C	D	P	C	I	E	K	Q	S	K	V	R	S	V	L	R	P	S	Q	F	G	G	Q	P	C	T	A	P	L	V	A	F	Q	P	C	I	P	S	K	L	C	K	I	E	E	A	D	C	K	N	K	F	R	C	D	S	G	R	C	I	A	R	K	L	E	C	N	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S						B									T	T						S		S	B								S	S	S	S								S	S					T	T	S					G	G	G	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	D	C	G	D	N	S	D	E	R	D	C	G	R	T	K	A	V	C	T	R	K	Y	N	P	I	P	S	V	Q	L	M	G	N	G	F	H	F	L	A	G	E	P	R	G	E	V	L	D	N	S	F	T	G	G	I	C	K	T	V	K	S	S	R	T	S	N	P	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	S	G	G	G	T	T		S	S				S	S	S	S						T	T	G	G	G	G	G					T	T	T	T							B		S	S				S								T	T	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	P	A	N	L	E	N	V	G	F	E	V	Q	T	A	E	D	D	L	K	T	D	F	Y	K	D	L	T	S	L	G	H	V	P	I	F	Y	S	S	K	R	S	E	N	I	N	H	N	S	A	F	K	Q	A	I	Q	A	S	H	K	K	D	S	S	F	I	R	I	H	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T												G	G	G							S		G	G	G	G	G								T	T	T							T	T											T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	M	K	V	L	N	F	T	T	K	A	K	D	L	H	L	S	D	V	F	L	K	A	L	N	H	L	P	L	E	Y	N	S	A	L	Y	S	R	I	F	D	D	F	G	T	H	Y	F	T	S	G	S	L	G	G	V	Y	D	L	L	Y	Q	F	S	S	E	E	L	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S			B								T	T	S	S		S	S															S				S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	G	L	T	E	E	E	A	K	H	C	V	R	I	E	T	K	K	R	V	L	F	A	K	K	T	K	V	E	H	R	C	T	T	N	K	L	S	E	K	H	E	G	S	F	I	Q	G	A	E	K	S	I	S	L	I	R	G	G	R	S	E	Y	G	A	A	L	A	W	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T																		T	S									G	G	G	T	S	S	T	T	G	G	G	G	T	T		S	G	G	G	S	S							B	S	S									S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	G	S	S	G	L	E	E	K	T	F	S	E	W	L	E	S	V	K	E	N	P	A	V	I	D	F	E	L	A	P	I	V	D	L	V	R	N	I	P	C	A	V	T	K	R	N	N	L	R	K	A	L	Q	E	Y	A	A	K	F	D	P	C	Q	C	A	P	C	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S	S	S	S														S										B	G	G	G	G			S	S	T	T																		T	T		G	G	G	S			B	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	G	R	P	T	L	S	G	T	E	C	L	C	V	C	Q	S	G	T	Y	G	E	N	C	E	K	Q	S	P	D	Y	K	S	N	A	V	D	G	Q	W	G	C	W	S	S	W	S	T	C	D	A	T	Y	K	R	S	R	T	R	E	C	N	N	P	A	P	Q	R	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B						T	T								T	T	B		S	T	T	S			B		S	S						B															S	S	S								S		S	S			B	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	R	C	E	G	E	K	R	Q	E	E	D	C	T	P	C	I	N	D	D	E	E	D	S	G	C	P	Q	P	V	P	P	E	N	G	F	I	R	N	E	K	Q	L	Y	L	V	G	E	D	V	E	I	S	C	L	T	G	F	E	T	V	G	Y	Q	Y	F	R	C	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		S																			B							T	T				S				S		B		T	T									T	T					S								T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	G	T	W	R	Q	G	D	V	E	C	Q	R	T	E	C	I	K	P	V	V	Q	E	V	L	T	I	T	P	F	Q	R	L	Y	R	I	G	E	S	I	E	L	T	C	P	K	G	F	V	V	A	G	P	S	R	Y	T	C	Q	G	N	S	W	T	P	P	I	S	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S						S															S	S	S	B		S	S			S				T	T						B			T	T				S	S		S					B	T	T	B		S				T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	T	C	E	K	D	T	G	H	C	Q	L	G	Q	K	Q	S	G	S	E	C	I	C	M	S	P	E	E	D	C	S	H	H	S	E	D	L	C	V	F	D	T	D	S	N	D	Y	F	T	S	P	A	C	K	F	L	A	E	K	C	L	N	N	Q	Q	L	H	F	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	T	T				S	T	T	S												S			S							T	T	T	T															T	T	G	G	G	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	I	G	S	C	Q	D	G	R	Q	L	E	W	G	L	E	R	T	R	L	S	S	N	S	T	K	K	E	S	C	G	Y	D	T	C	Y	D	W	E	K	C	S	A	S	T	S	K	C	V	C	L	L	P	P	Q	C	F	K	G	G	N	Q	L	Y	C	V	K	M	G	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S				S												T		T	T							S	S	S					T	T					S	S	S		S						T	T				S				B							S	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.
Sequence	T	S	E	K	T	L	N	I	C	E	V	G	T	I	R	C	A	N	R	K	M	E	I	L	H	P	G	K	C	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S					B											T								S	S

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PDB structure

FASTA sequence

Hidden Markov model

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