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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3t35A_

Fold library idPDB HeaderMoleculeTitle
c3t35A_PDB header: motor proteinChain: A: PDB Molecule: dynamin-related protein 1a, linker, dynamin-related proteinPDBTitle: arabidopsis thaliana dynamin-related protein 1a in postfission state


Added to library: Sat Jun 9 11:58:13 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NLISLVNKIQRACTALGDHGDSSALPTLWDSLPAIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPL
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Known secondary structure (DSSP)
TTTTTTTTSTTS

SSSSSSTTTT




TTSSTTTTTTS

S


SS



S

 .........80.........90.........100.........110.........120.........130.........140
Sequence VLQLQKIDDGTREYAEFLHLPRKKFTDFAAVRKEIQDETDRETGRSKAISSVPIHLSIYSPNVVNLTLID
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Known secondary structure (DSSP)




SS



B

SSSTT

B

GGGTS
SS








B

TTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence LPGLTKVAVDGQSDSIVKDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPSGDRTFGVLTK
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Known secondary structure (DSSP)




SS

SSS
SSSSSTTS



SSS
STT
TTS
TT
SS




 .........220.........230.........240.........250.........260.........270.........280
Sequence IDLMDKGTDAVEILEGRSFKLKYPWVGVVNRSQADINKNVDMIAARKREREYFSNTTEYRHLANKMGSEH
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Known secondary structure (DSSP)
TTS
SS

STT
SS

SS
B






TTT

STSGGGTTTGGG
S
 .........290.........300.........310.........320.........330.........
Sequence LAKMLSKHLERVIKSRIPGIQSLINKTVLELETEIMERRSAISKRLELYRAAQSEIDAV
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Known secondary structure (DSSP) TT


SSSSTTSSTTTTT



SSTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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