PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3t1wA_

Fold library id	PDB Header	Molecule	Title
c3t1wA_	PDB header: protein binding	Chain: A: PDB Molecule: four-domain fibronectin fragment;	PDBTitle: structure of the four-domain fragment fn7b89 of oncofetal fibronectin

Links to external resources
Added to library: Sat Mar 24 13:03:08 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P L S P P T N L H L E A N P D T G V L T V S W E R S T T P D I T G Y R I T T T P T N G Q Q G N S L E E V V H A D Q S S C T F D N L S P G L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S
S S
T T
T T S
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y N V S V Y T V K D D K E S V P I S D T I I P E V P Q L T D L S F V D I T D S S I G L R W T P L N S S T I I G Y R I T V V A A G E G I P I F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S
T T S S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E D F V D S S V G Y Y T V T G L E P G I D Y D I S V I T L I N G G E S A P T T L T Q Q T A V P P P T D L R F T N I G P D T M R V T W A P P P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T
S
S S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence S I D L T N F L V R Y S P V K N E E D V A E L S I S P S D N A V V L T N L L P G T E Y V V S V S S V Y E Q H E S T P L R G R Q K T G L D S P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G T T
T T
S
T T
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence T G I D F S D I T A N S F T V H W I A P R A T I T G Y R I R H H P E H F S G R P R E D R V P H S R N S I T L T N L T P G T E Y V V S I V A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S S
S T T
S S
T T
S
T T

. . . . . . . . . 360 . . . . . . . .

Sequence N G R E E S P L L I G Q Q S T V S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	L	S	P	P	T	N	L	H	L	E	A	N	P	D	T	G	V	L	T	V	S	W	E	R	S	T	T	P	D	I	T	G	Y	R	I	T	T	T	P	T	N	G	Q	Q	G	N	S	L	E	E	V	V	H	A	D	Q	S	S	C	T	F	D	N	L	S	P	G	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T	T										S		S	S											T	T		T	T	S									T	T											T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	N	V	S	V	Y	T	V	K	D	D	K	E	S	V	P	I	S	D	T	I	I	P	E	V	P	Q	L	T	D	L	S	F	V	D	I	T	D	S	S	I	G	L	R	W	T	P	L	N	S	S	T	I	I	G	Y	R	I	T	V	V	A	A	G	E	G	I	P	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T																		S									S	S												T	T											S	S	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	D	F	V	D	S	S	V	G	Y	Y	T	V	T	G	L	E	P	G	I	D	Y	D	I	S	V	I	T	L	I	N	G	G	E	S	A	P	T	T	L	T	Q	Q	T	A	V	P	P	P	T	D	L	R	F	T	N	I	G	P	D	T	M	R	V	T	W	A	P	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T											T	T												T	T																								S			S	S										S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	I	D	L	T	N	F	L	V	R	Y	S	P	V	K	N	E	E	D	V	A	E	L	S	I	S	P	S	D	N	A	V	V	L	T	N	L	L	P	G	T	E	Y	V	V	S	V	S	S	V	Y	E	Q	H	E	S	T	P	L	R	G	R	Q	K	T	G	L	D	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S													G	G	G	T	T									T	T								S			T	T												T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	G	I	D	F	S	D	I	T	A	N	S	F	T	V	H	W	I	A	P	R	A	T	I	T	G	Y	R	I	R	H	H	P	E	H	F	S	G	R	P	R	E	D	R	V	P	H	S	R	N	S	I	T	L	T	N	L	T	P	G	T	E	Y	V	V	S	I	V	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S			S	S										S	S			S									T	T			S	S								T	T								S			T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Sequence	N	G	R	E	E	S	P	L	L	I	G	Q	Q	S	T	V	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T