Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3sxpD_

Fold library idPDB HeaderMoleculeTitle
c3sxpD_PDB header: isomeraseChain: D: PDB Molecule: adp-l-glycero-d-mannoheptose-6-epimerase;PDBTitle: crystal structure of helicobacter pylori adp-l-glycero-d-manno-2 heptose-6-epimerase (rfad, hp0859)


Added to library: Sat Feb 11 13:32:26 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRYIDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNPSSLGHFKNLIGFKGEVIAADI
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)

SSS


TT
TTTS
TTS










GGGGTT

S

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence NNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKA
Predicted secondary structure




















































SS confidence





































































Known secondary structure (DSSP) T
TTS

S




GGG


TTT
GGGG
S

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEV
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) SB
TTS



SSTTTTS

SSTT
GGGGGGS
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KLFEFGEQLRDFVYIEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVTYIKNFFQKH
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)

SGGG


TT
SS
S
S













 .........290.........300.........310....
Sequence TQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAI
Predicted secondary structure













SS confidence

































Known secondary structure (DSSP)

B








T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D