PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3stgA_

Fold library id	PDB Header	Molecule	Title
c3stgA_	PDB header: transferase	Chain: A: PDB Molecule: 2-dehydro-3-deoxyphosphooctonate aldolase;	PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis

Links to external resources
Added to library: Sat Nov 26 19:50:21 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M D I K I N D I T L G N N S P F V L F G G I N V L E S L D S T L Q T C A H Y V E V T R K L G I P Y I F K A S F D K P R S S I H S Y R G V G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S
T
S
T T S
T T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E E G L K I F E K V K A E F G I P V I T D V H E P H Q C Q P V A E V C D V I Q L P A F L A R Q T D L V V A M A K T G N V V N I K K P Q F L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
G G G T T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P S Q M K N I V E K F H E A G N G K L I L C E R G S S F G Y D N L V V D M L G F G V M K Q T C G N L P V I F D V T H S L G R R A Q A L D L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T T
S S S
T T T T
T T T T
S S G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260

Sequence L A G M A T R L A G L F L E S H P D P S A L P L H L L E D F L I R I K A L D D L I K S Q P I L T I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S G G G S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	I	K	I	N	D	I	T	L	G	N	N	S	P	F	V	L	F	G	G	I	N	V	L	E	S	L	D	S	T	L	Q	T	C	A	H	Y	V	E	V	T	R	K	L	G	I	P	Y	I	F	K	A	S	F	D	K	P	R	S	S	I	H	S	Y	R	G	V	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T					T	T	S																																T									S			T	T	S		T	T	S				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	E	G	L	K	I	F	E	K	V	K	A	E	F	G	I	P	V	I	T	D	V	H	E	P	H	Q	C	Q	P	V	A	E	V	C	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	L	V	V	A	M	A	K	T	G	N	V	V	N	I	K	K	P	Q	F	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S												S						G	G	G	T	T																					T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	S	Q	M	K	N	I	V	E	K	F	H	E	A	G	N	G	K	L	I	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	D	M	L	G	F	G	V	M	K	Q	T	C	G	N	L	P	V	I	F	D	V	T	H	S	L	G	R	R	A	Q	A	L	D	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G											T	T														S	S	S						T										T	T	T							T	T	T	T		S	S	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Sequence	L	A	G	M	A	T	R	L	A	G	L	F	L	E	S	H	P	D	P	S	A	L	P	L	H	L	L	E	D	F	L	I	R	I	K	A	L	D	D	L	I	K	S	Q	P	I	L	T	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T			S												S			G	G	G																		S