PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3st1A_

Fold library id	PDB Header	Molecule	Title
c3st1A_	PDB header: toxin	Chain: A: PDB Molecule: necrosis-and ethylene-inducing protein;	PDBTitle: crystal structure of necrosis and ethylene inducing protein 2 from the2 causal agent of cocoa's witches broom disease

Links to external resources
Added to library: Sat Nov 5 19:10:41 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A G T V M D H D K I A K L P A S G S P L E T K F Q P Q L H I G N G C H S Y P A V D A Q G N W S G G L K P T G A P S A A C K D T S K A Q T Y V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
T
S S
B
S B
T T S
S
S S T T T T
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R S A T F Q G K T A L V Y A W Y M P K D E I S T G I G H R H D W E G A V V F L N S D T Q Q I D G V A A S A H G K W R K Y P N P G G A N I D D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T T
T T S
G G G T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T H V K L Q Y S A E P V I N S H A L D L T D K G G D L P T L A S W E G M G A D A R A A I N E R S H W G D A N P P I A D S L I G S S L S G A W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T G G G T
S S
B
T T T S
G G G S T T
T T S T T T

. .

Sequence M W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	G	T	V	M	D	H	D	K	I	A	K	L	P	A	S	G	S	P	L	E	T	K	F	Q	P	Q	L	H	I	G	N	G	C	H	S	Y	P	A	V	D	A	Q	G	N	W	S	G	G	L	K	P	T	G	A	P	S	A	A	C	K	D	T	S	K	A	Q	T	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	S														T								S	S				B		S	B		T	T	S								S		S	S	T	T	T	T				G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	S	A	T	F	Q	G	K	T	A	L	V	Y	A	W	Y	M	P	K	D	E	I	S	T	G	I	G	H	R	H	D	W	E	G	A	V	V	F	L	N	S	D	T	Q	Q	I	D	G	V	A	A	S	A	H	G	K	W	R	K	Y	P	N	P	G	G	A	N	I	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T																	T	T																T	T	T											T	T							S			G	G	G			T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	H	V	K	L	Q	Y	S	A	E	P	V	I	N	S	H	A	L	D	L	T	D	K	G	G	D	L	P	T	L	A	S	W	E	G	M	G	A	D	A	R	A	A	I	N	E	R	S	H	W	G	D	A	N	P	P	I	A	D	S	L	I	G	S	S	L	S	G	A	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										G	G	G	T								S	S			B							T	T	T	S											G	G	G	S	T	T				T	T	S	T	T	T
	.	.
Sequence	M	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)