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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3srjB_

Fold library idPDB HeaderMoleculeTitle
c3srjB_PDB header: cell invasion/inhibitorChain: B: PDB Molecule: apical membrane antigen 1, ama1;PDBTitle: pfama1 in complex with invasion-inhibitory peptide r1


Added to library: Sat Jul 14 13:20:50 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MGNPWTEYMAKYDIEEVHGSGIRVDLGEDAEVAGTQYRLPSGKCPVFGKGIIIENSKTTFLTPVATGNQY
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Known secondary structure (DSSP)


TTTTTTGGG
T
S
SSB


TT


SS
TTT
SS
TTSBB

GGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LKDGGFAFPPTEPLMSPMTLDEMRHFYKDNKYVKNLDELTLCSRHAGNMIPDNDKNSNYKYPAVYDDKDK
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Known secondary structure (DSSP) TTSB
SB



SS

SSTTT
TS
T

GGG
TT





TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KCHILYIAAQENNGPRYCSMFCFRPAKDISFQNYVYLSKNVVDNWEKVCPRKNLQNAKFGLWVDGNCEDI
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Known secondary structure (DSSP) BS




B

TTT





GGGTT
TT

TTS

STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence PHVNEFPAIDLFECNKLVFELSASDQPKQDRYKSHGKGYNWGNYNTETQKCEIFNVKPTCLINDKSYIAT
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Known secondary structure (DSSP) SS

SSS
BSS




S

TT
SS
TTTT
S


 .........290.......
Sequence TALSHPIEVENNFPSVP
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Known secondary structure (DSSP) TTS
SS

S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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