Fold library entry viewer: c3spaA_

Added to library: Sat Oct 1 10:19:09 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	L	S	G	Q	Q	Q	R	L	L	A	F	F	K	C	C	L	L	T	D	Q	L	P	L	A	H	H	L	L	V	V	H	H	G	Q	R	Q	K	R	K	L	L	T	L	D	M	Y	N	A	V	M	L	G	W	A	R	Q	G	A	F	K	E	L	V	Y	V	L	F	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T															S					T	T																	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	D	A	G	L	T	P	D	L	L	S	Y	A	A	A	L	Q	C	M	G	R	Q	D	Q	D	A	G	T	I	E	R	C	L	E	Q	M	S	Q	E	G	L	K	L	Q	A	L	F	T	A	V	L	L	S	E	E	D	R	A	T	V	L	K	A	V	H	K	V	K	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																			T																	T			S							S															G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	S	L	P	P	Q	L	P	P	P	V	N	T	S	K	L	L	R	D	V	Y	A	K	D	G	R	V	S	Y	P	K	L	H	L	P	L	K	T	L	Q	C	L	F	E	K	Q	L	H	M	E	L	A	S	R	V	C	V	V	S	V	E	K	P	T	L	P	S	K	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T								S								S	S																											S							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	H	A	R	K	T	L	K	T	L	R	D	Q	W	E	K	A	L	C	R	A	L	R	E	T	K	N	R	L	E	R	E	V	Y	E	G	R	F	S	L	Y	P	F	L	C	L	L	D	E	R	E	V	V	R	M	L	L	Q	V	L	Q	A	L	P	A	Q	G	E	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																			T	T				S	T	G	G	G	G	S	S																		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	T	L	A	R	E	L	S	A	R	T	F	S	R	H	V	V	Q	R	Q	R	V	S	G	Q	V	Q	A	L	Q	N	H	Y	R	K	Y	L	C	L	L	A	S	D	A	E	V	P	E	P	C	L	P	R	Q	Y	W	E	A	L	G	A	P	E	A	L	R	E	Q	P	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T													G	G	G	T		S	S				S	S																	G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	L	P	V	Q	M	E	L	G	K	L	L	A	E	M	L	V	Q	A	T	Q	M	P	C	V	P	V	L	Y	H	V	Y	S	Q	Q	I	G	I	L	K	P	H	P	A	Y	V	Q	L	L	E	K	A	A	E	P	T	L	T	F	E	A	V	D	V	P	M	L	C	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					B					B	S																										T		S						G	G	G	S		B	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	P	W	T	S	P	H	S	G	A	F	L	L	S	P	T	K	L	M	R	T	V	E	G	A	T	Q	H	Q	E	L	L	E	T	C	P	P	T	A	L	H	G	A	L	D	A	L	T	Q	L	G	N	C	A	W	R	V	N	G	R	V	L	D	L	V	L	Q	L	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T				S	S	S	S				S	B				T	T										S	S		G	G	G	G												T																		T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	K	G	C	P	Q	L	G	V	P	A	P	P	R	E	M	H	S	L	R	A	E	A	L	Y	R	L	S	L	A	Q	H	L	R	D	R	V	F	W	L	P	H	N	M	D	F	R	G	R	T	Y	P	C	P	P	H	F	N	H	L	G	S	D	V	A	R	A	L	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		B	G	G	G	T	B						T																			T	T	S										T	T						S		S	S	S		S		S	S						T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	A	Q	G	R	P	L	G	P	H	G	L	D	W	L	K	I	H	L	V	N	L	T	G	L	K	K	R	E	P	L	R	K	R	L	A	F	A	E	E	V	M	D	D	I	L	D	S	A	D	Q	P	L	T	G	R	K	W	W	M	G	A	E	E	P	W	Q	T	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S					T	T	T														S			T	T	S																							T	T	T	S			G	G	G	G	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	C	C	M	E	V	A	N	A	V	R	A	S	D	P	A	A	Y	V	S	H	L	P	V	H	Q	D	G	S	C	N	G	L	Q	H	Y	A	A	L	G	R	D	S	V	G	A	A	S	V	N	L	E	P	S	D	V	P	Q	D	V	Y	S	G	V	A	A	Q	V	E	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	S	S	S	G	G	G												S	S										T	T								T	T		S			S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	R	Q	D	A	Q	R	G	M	R	V	A	Q	V	L	E	G	F	I	T	R	K	V	V	K	Q	T	V	M	T	V	V	Y	G	V	T	R	Y	G	G	R	L	Q	I	E	K	R	L	R	E	L	S	D	F	P	Q	E	F	V	W	E	A	S	H	Y	L	V	R	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T							T	T	T																			S	S	S												T		T	T	S		T	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	F	K	S	L	Q	E	M	F	S	G	T	R	A	I	Q	H	W	L	T	E	S	A	R	L	I	S	H	M	G	S	V	V	E	W	V	T	P	L	G	V	P	V	I	Q	P	Y	R	L	D	K	P	N	T	R	K	Q	K	N	G	F	P	P	N	F	I	H	S	L	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												T	T								T	T	S								B				B
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	S	H	M	M	L	T	A	L	H	C	Y	R	K	G	L	T	F	V	S	V	H	D	C	Y	W	T	H	A	A	D	V	S	V	M	N	Q	V	C	R	E	Q	F	V	R	L	H	S	E	P	I	L	Q	D	L	S	R	F	L	V	K	R	F	C	S	E	P	Q	K	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T							T	T						G	G	G																		S															S			T	T	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.
Sequence	E	A	S	Q	L	K	E	T	L	Q	A	V	P	K	P	G	A	F	D	L	E	Q	V	K	R	S	T	Y	F	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S						S			G	G	G	G	G	G		T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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