PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3shgA_

Fold library id	PDB Header	Molecule	Title
c3shgA_	PDB header: transferase/protein binding	Chain: A: PDB Molecule: vbht;	PDBTitle: vbht fic protein from bartonella schoenbuchensis in complex with vbha2 antitoxin

Links to external resources
Added to library: Sat Jan 28 16:46:28 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V R K Y E G S N D P Y T D P E T G V M Y N L L G I K D Q A R L E R V E S A F A Y I R S F E L G R T S I S G K F D L D H M K K I H K K L F G D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G
T T B
T T T
S B
S S
S
S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V Y E W A G K T R L V D I V K D N S K F A H Y T Q I E S Y A P Q I T Q Q L A R E Q H L R G L D A N E F S Q R A G Y Y M G E L N A L H P F R E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T T
S S
T T
G G G T G G G T T
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . .

Sequence G N G R T L R E F I W Q L A R E A G Y H I D W D R V E R Q E M T R A S I E S Y Y G N S D L M S A L I R R N L T E F T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	R	K	Y	E	G	S	N	D	P	Y	T	D	P	E	T	G	V	M	Y	N	L	L	G	I	K	D	Q	A	R	L	E	R	V	E	S	A	F	A	Y	I	R	S	F	E	L	G	R	T	S	I	S	G	K	F	D	L	D	H	M	K	K	I	H	K	K	L	F	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		G	G	G		T	T	B		T	T	T		S	B			S	S																										S						S	S													T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	Y	E	W	A	G	K	T	R	L	V	D	I	V	K	D	N	S	K	F	A	H	Y	T	Q	I	E	S	Y	A	P	Q	I	T	Q	Q	L	A	R	E	Q	H	L	R	G	L	D	A	N	E	F	S	Q	R	A	G	Y	Y	M	G	E	L	N	A	L	H	P	F	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		T	T	T	T				S	S					T	T						G	G	G															T	G	G	G	T	T																							S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Sequence	G	N	G	R	T	L	R	E	F	I	W	Q	L	A	R	E	A	G	Y	H	I	D	W	D	R	V	E	R	Q	E	M	T	R	A	S	I	E	S	Y	Y	G	N	S	D	L	M	S	A	L	I	R	R	N	L	T	E	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T						T	T															T	T												T