Fold library entry viewer: c3se6A_

Added to library: Sat Dec 24 22:12:45 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	V	A	T	N	G	E	R	F	P	W	Q	E	L	R	L	P	S	V	V	I	P	L	H	Y	D	L	F	V	H	P	N	L	T	S	L	D	F	V	A	S	E	K	I	E	V	L	V	S	N	A	T	Q	F	I	I	L	H	S	K	D	L	E	I	T	N	A	T	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	S			S				S	S			T	T														T	T	T	T													S	S			S							S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	E	E	Y	M	K	P	G	K	E	L	K	V	L	S	Y	P	A	H	E	Q	I	A	L	L	V	P	E	K	L	T	P	H	L	K	Y	Y	V	A	M	D	F	Q	A	K	L	G	D	G	F	E	G	F	Y	K	S	T	Y	R	T	L	G	G	E	T	R	I	L	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S										G	G	G	T							S	S				T	T														B	S	S	S	S										T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	D	F	E	P	T	Q	A	R	M	A	F	P	C	F	D	E	P	L	F	K	A	N	F	S	I	K	I	R	R	E	S	R	H	I	A	L	S	N	M	P	K	V	K	T	I	E	L	E	G	G	L	L	E	D	H	F	E	T	T	V	K	M	S	T	Y	L	V	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T	G	G	G	T	S		B			S	T	T			B										T	T						S	S									T	T	S											S	B		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	V	C	D	F	H	S	L	S	G	F	T	S	S	G	V	K	V	S	I	Y	A	S	P	D	K	R	N	Q	T	H	Y	A	L	Q	A	S	L	K	L	L	D	F	Y	E	K	Y	F	D	I	Y	Y	P	L	S	K	L	D	L	I	A	I	P	D	F	A	P	G	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T										G	G	G	G	G	G	G																			T					S	S								S	S		S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	N	W	G	L	I	T	Y	R	E	T	S	L	L	F	D	P	K	T	S	S	A	S	D	K	L	W	V	T	R	V	I	A	H	E	L	A	H	Q	W	F	G	N	L	V	T	M	E	W	W	N	D	I	W	L	N	E	G	F	A	K	Y	M	E	L	I	A	V	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T						G	G	G	T				T	T	T																		G	G	G	T	B	T	T	T				S	S	G	G	G	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	Y	P	E	L	Q	F	D	D	Y	F	L	N	V	C	F	E	V	I	T	K	D	S	L	N	S	S	R	P	I	S	K	P	A	E	T	P	T	Q	I	Q	E	M	F	D	E	V	S	Y	N	K	G	A	C	I	L	N	M	L	K	D	F	L	G	E	E	K	F	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G															T	T	T	T	S	T	T				S	S					S							T	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	I	I	Q	Y	L	K	K	F	S	Y	R	N	A	K	N	D	D	L	W	S	S	L	S	N	S	L	G	E	N	A	E	V	K	E	M	M	T	T	W	T	L	Q	K	G	I	P	L	L	V	V	K	Q	D	G	C	S	L	R	L	Q	Q	E	R	F	L	Q	G	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T																																S		S										T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	Y	L	W	H	I	P	L	T	Y	S	T	S	S	S	N	V	I	H	R	H	I	L	K	S	K	T	D	T	L	D	L	P	E	K	T	S	W	V	K	F	N	V	D	S	N	G	Y	Y	I	V	H	Y	E	G	H	G	W	D	Q	L	I	T	Q	L	N	Q	N	H	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												S	S											S	S							S	S			S					S	G	G	G		S	S							T	T													G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	L	R	P	K	D	R	V	G	L	I	H	D	V	F	Q	L	V	G	A	G	R	L	T	L	D	K	A	L	D	M	T	Y	Y	L	Q	H	E	T	S	S	P	A	L	L	E	G	L	S	Y	L	E	S	F	Y	H	M	M	D	R	R	N	I	S	D	I	S	E	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S																		T	T	S	S									T	T	G	G	G	T																								S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	R	Y	L	L	Q	Y	F	K	P	V	I	D	R	Q	S	W	S	D	K	G	S	V	W	D	R	M	L	R	S	A	L	L	K	L	A	C	D	L	N	H	A	P	C	I	Q	K	A	A	E	L	F	S	Q	W	M	E	S	S	G	K	L	N	I	P	T	D	V	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T									S	S			S																		T	T																		T	T	T		S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	I	V	Y	S	V	G	A	Q	T	T	A	G	W	N	Y	L	L	E	Q	Y	E	L	S	M	S	S	A	E	Q	N	K	I	L	Y	A	L	S	T	S	K	H	Q	E	K	L	L	K	L	I	E	L	G	M	E	G	K	V	I	K	T	Q	N	L	A	A	L	L	H	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S															S													T	T																		S	S	S		G	G	G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	R	R	P	K	G	Q	Q	L	A	W	D	F	V	R	E	N	W	T	H	L	L	K	K	F	D	L	G	S	Y	D	I	R	M	I	I	S	G	T	T	A	H	F	S	S	K	D	K	L	Q	E	V	K	L	F	F	E	S	L	E	A	Q	G	S	H	L	D	I	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T																				S		T	T	S									T	T	T	T	T			S														S		S	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870
Sequence	T	V	L	E	T	I	T	K	N	I	K	W	L	E	K	N	L	P	T	L	R	T	W	L	M	V	N	T	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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