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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3sb4B_

Fold library idPDB HeaderMoleculeTitle
c3sb4B_PDB header: protein bindingChain: B: PDB Molecule: hypothetical leucine rich repeat protein;PDBTitle: crystal structure of a hypothetical leucine rich repeat protein2 (bt_1240) from bacteroides thetaiotaomicron vpi-5482 at 1.99 a3 resolution


Added to library: Sun Jun 26 11:33:37 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QVSKTYYVSKPGTLISXXTEEEANSITHLTLTGKLNAEDFRHLRDEFPSLKVLDISNAEIKXYSGKAGTY
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Known secondary structure (DSSP)

SSTT
GGGGS

S
S
TT



SSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PNGKFYIYXANFVPAYAFSNVVNGVTKGKQTLEKVILSEKIKNIEDAAFKGCDNLKICQIRKKTAPNLLP
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Known secondary structure (DSSP) GGG


TT
TTTTTT
TT


TT


TTTTTT
TT



SS


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence EALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAXGKLEDEIXKAGLQPRDINFLTIEG
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Known secondary structure (DSSP) TSS
TTT

TT
TTSTTTTTS
S



TT

TT

GGG
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence KLDNADFKLIRDYXPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHNLKTIGQRVFSNCGRLAGTLEL
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Known secondary structure (DSSP)



TT


TTB



TTTTTT
TT



TT


TTTTTT
TT

 .........290.........300.........310.........320........
Sequence PASVTAIEFGAFXGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYKK
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Known secondary structure (DSSP)
TT


TTTTTT
TT
SS



TTTT
TT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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