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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3samB_

Fold library idPDB HeaderMoleculeTitle
c3samB_PDB header: viral proteinChain: B: PDB Molecule: rifampicin resistance protein;PDBTitle: structure of d13, the scaffolding protein of vaccinia virus (mutant2 d513g)


Added to library: Sun Jun 26 11:19:37 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GAMNNTIINSLIGDSIKRSNVFAVDSQIPTLYMPQYISLSGVMTNDNQAIASFEIRDQYITALNHLVLSL
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Known secondary structure (DSSP)






S



SS















SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence ELPEVKGMGRFGYVPYVGYKCINHVSISSCNGVIWEIEGEELYNNCINNTIALKHSGYSSELNDISIGLT
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Known secondary structure (DSSP)

SS
TTTTTT
TT

S

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PNDTIKEPSTVYVYIKTPFDVEDTFSSLKLSDSKITVTVTFNPVSDIVIRDSSFDFETFNKEFVYVPELS
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Known secondary structure (DSSP) TT




TTSTTGGGGS
SS



GGGT
TTS




 .........220.........230.........240.........250.........260.........270.........280
Sequence FIGYMVKNVQIKPSFIEKPRRVIGQINQPTATVTEVHAATSLSVYTKPYYGNTDNKFISYPGYSQDEKDY
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Known secondary structure (DSSP) TT






TT
S

S
TTS

S


TT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence IDAYVSRLLDDLVIVSDGPPTGYPESAEIVEVPEDGIVSIQDADVYVKIDNVPDNMSVYLHTNLLMFGTR
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Known secondary structure (DSSP) SSS

SS
TT



TT
TTS

TT
TTSB
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence KNSFIYNISKKFSAITGTYSDATKRTIFAHISHSINIIDTSIPVSLWTSQRNVYNGDNRSAESKAKDLFI
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Known secondary structure (DSSP) TTS

GGGGTTTT


TTGGG

T
SS
SS

B


TT

 .........430.........440.........450.........460.........470.........480.........490
Sequence NDPFIKGIDFKNKTDIISRLEVRFGNDVLYSENGPISRIYNELLTKSNNGTRTLTFNFTPKIFFRPTTIT
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Known secondary structure (DSSP)

TT

TTSTT

S

TTSS
T
SS




S
TTTS



 .........500.........510.........520.........530.........540....
Sequence ANVSRGKDKLSVRVVYSTMGVNHPIYYVQKQLVVVCNDLYKVSYDQGVSITKIM
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Known secondary structure (DSSP)
BGGGTB



SSS
GGGGS
TTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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