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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3s9jA_

Fold library idPDB HeaderMoleculeTitle
c3s9jA_PDB header: unknown functionChain: A: PDB Molecule: member of duf4221 family;PDBTitle: crystal structure of a member of duf4221 family (bvu_1028) from2 bacteroides vulgatus atcc 8482 at 1.75 a resolution


Added to library: Sun Jun 26 11:19:11 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KQNEVELVAEKQLAFPLDEQTYYLSKSXFQFEENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKT
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Known secondary structure (DSSP)
TTS

TTS
S

SSTT
STT

TTTT
BSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQGEIIRNYNFQTPEGRFTPLSFGSYYNAPAFIKDS
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Known secondary structure (DSSP) STTB
TT


SSSTTSGGGT
TT




TTS






BTTTTB

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence CIFLRQEILKPDXKKEDWPRTHXFASQDLRTGEVKWIPIFYPPIFKEEYDNIAGGYGFSYDYNYKESRLV
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Known secondary structure (DSSP)


SSSS

GGGGGGSTTT



S





SS


TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence CGFFGYDSLXVTDDLKHIRWYNAKSRYLKSXKPKLGNSXEGINAIIKLNENPRYWHIXYDKYRNVYYRFA
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Known secondary structure (DSSP) TT
SSSSS



TTS






GGGTS
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EXPYKLAPNESPYETPKGKEFSVIVLNADFEIIGETKFPGKKYFYKXSFVGREGLYISENNLENPQFDEN
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Known secondary structure (DSSP)





TTS
TTS

TT


TT


SSS
TT


TTSTT

TT
 .........360..
Sequence KLVFTCFKIKNA
Predicted secondary structure


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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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