PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3s81A_

Fold library id	PDB Header	Molecule	Title
c3s81A_	PDB header: isomerase	Chain: A: PDB Molecule: putative aspartate racemase;	PDBTitle: crystal structure of putative aspartate racemase from salmonella2 typhimurium

Links to external resources
Added to library: Sat Jun 18 22:00:13 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K H T I G I L G G M G P A A T A D M L E K F V E L R H A S C D Q Q H I P L I V S S I P D I P D R T A C L L S G G P S P Y R Y L E R Y L H M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S S G G G S
T T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L E D A G A E C I V I P C N T A H Y W F D D L Q N V A K A R M I S I L D A T L G D I P P S A R H V G L L A T N A T L A T G L Y Q K K A L A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S
S G G G G G
S S
T S
T T
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G L T L I Q P E D A G Q A L V M Q A I Y T L K R G D K T A A Q A L L L P Q I D S L I A R G A Q A I I M G C T E I P L I V A G H E R A I A C P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
T T
S
S T T T T T G G G S S S

. . . . . . . . . 220 . . . . . . . . . 230 . .

Sequence M I D S T A S L V R A A I R W Y E S W P D T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	H	T	I	G	I	L	G	G	M	G	P	A	A	T	A	D	M	L	E	K	F	V	E	L	R	H	A	S	C	D	Q	Q	H	I	P	L	I	V	S	S	I	P	D	I	P	D	R	T	A	C	L	L	S	G	G	P	S	P	Y	R	Y	L	E	R	Y	L	H	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S															S			S	S	G	G	G	S									T	T	S														S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	E	D	A	G	A	E	C	I	V	I	P	C	N	T	A	H	Y	W	F	D	D	L	Q	N	V	A	K	A	R	M	I	S	I	L	D	A	T	L	G	D	I	P	P	S	A	R	H	V	G	L	L	A	T	N	A	T	L	A	T	G	L	Y	Q	K	K	A	L	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S					S		S	G	G	G	G	G									S	S												T	S		T	T															T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	L	T	L	I	Q	P	E	D	A	G	Q	A	L	V	M	Q	A	I	Y	T	L	K	R	G	D	K	T	A	A	Q	A	L	L	L	P	Q	I	D	S	L	I	A	R	G	A	Q	A	I	I	M	G	C	T	E	I	P	L	I	V	A	G	H	E	R	A	I	A	C	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																							T	T																			T	T		S						S	T	T						T	T	T	G	G	G	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Sequence	M	I	D	S	T	A	S	L	V	R	A	A	I	R	W	Y	E	S	W	P	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	S	T	T