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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c3s6lD_ | PDB header: cell adhesion | Chain: D: PDB Molecule: hep_hag family; | PDBTitle: crystal structure of a yada-like head domain of the trimeric2 autotransporter adhesin boaa from burkholderia pseudomallei solved by3 iodide ion sad phasing |
| Added to library: Sun Jun 26 11:22:00 2011 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| Sequence | V | R | T | S | S | L | G | D | T | S | A | G | N | G | A | N | A | S | G | G | N | G | T | A | V | G | G | A | A | S | A | S | G | T | D | A | T | A | L | G | Q | A | S | N | A | S | G | N | H | S | T | A | L | G | Q | A | S | S | A | S | G | S | G | S | T | A | V | G | Q | G |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | S | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
| Sequence | A | G | A | P | G | D | G | A | S | A | F | G | Q | G | A | L | A | S | G | T | D | S | T | A | L | G | A | H | S | T | A | A | A | P | N | S | A | A | I | G | A | N | S | V | A | S | A | P | N | S | V | S | F | G | S | R | G | H | E | R | R | L | T | N | V | A | P | G | I | D |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | B | S | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S | T | T | ![]() | ![]() | S | S | B | T | T | B | S | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | ||||
| Sequence | G | T | D | A | A | N | M | N | Q | L | W | G | V | Q | S | S | V | D | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
| Download: | PDB structure | FASTA sequence |
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