PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3s5tA_

Fold library id	PDB Header	Molecule	Title
c3s5tA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: duf3298 family protein;	PDBTitle: crystal structure of a member of duf3298 family (bf2082) from2 bacteroides fragilis nctc 9343 at 2.30 a resolution

Links to external resources
Added to library: Mon Jul 4 03:55:03 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K N T G A L E F D S I Q V N E T A H L F G D T A K P A C N L T I N F A Y P V K S T D N K L K D S L N S Y F I A A C F G E G Y I G E K P A Q V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G
T T S
S
T
G G G T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V K E Y T E H Y V K E Y R T D L E P X Y A E D E K N K S I G A W Y S Y Y K G I E S H V Q L Y Y K N L L V Y R I N Y N E Y T G G A H G I Y X T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T F L N X D L I N L R P L K L D D I F T G D Y K E A L T D L L W N Q L X A D K K V T T H E A L E D X G Y G S T G D I A P T E N F Y L D K D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
B
S S
T T
S
T T T T S S S
S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . .

Sequence I T F Y Y N V Y D I T P Y A X G P V E I K I P Y E X X E H X L G S N P I I G E X K S K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S
G G G
G G G S T T T B
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	N	T	G	A	L	E	F	D	S	I	Q	V	N	E	T	A	H	L	F	G	D	T	A	K	P	A	C	N	L	T	I	N	F	A	Y	P	V	K	S	T	D	N	K	L	K	D	S	L	N	S	Y	F	I	A	A	C	F	G	E	G	Y	I	G	E	K	P	A	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T															G	G	G		T	T	S																S																	T		G	G	G	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	K	E	Y	T	E	H	Y	V	K	E	Y	R	T	D	L	E	P	X	Y	A	E	D	E	K	N	K	S	I	G	A	W	Y	S	Y	Y	K	G	I	E	S	H	V	Q	L	Y	Y	K	N	L	L	V	Y	R	I	N	Y	N	E	Y	T	G	G	A	H	G	I	Y	X	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																															S	T	T															T	T													S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	F	L	N	X	D	L	I	N	L	R	P	L	K	L	D	D	I	F	T	G	D	Y	K	E	A	L	T	D	L	L	W	N	Q	L	X	A	D	K	K	V	T	T	H	E	A	L	E	D	X	G	Y	G	S	T	G	D	I	A	P	T	E	N	F	Y	L	D	K	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T									B		S	S																	T	T		S								T	T	T	T	S	S	S						S						S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Sequence	I	T	F	Y	Y	N	V	Y	D	I	T	P	Y	A	X	G	P	V	E	I	K	I	P	Y	E	X	X	E	H	X	L	G	S	N	P	I	I	G	E	X	K	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S	S	S		G	G	G									G	G	G	S	T	T	T	B		S