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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3s5bB_ | PDB header: hydrolase | Chain: B: PDB Molecule: endonuclease g; | PDBTitle: crystal structure of ced-3 protease suppressor-6 (cps-6) from2 caenorhabditis elegans |
Added to library: Sat Jan 14 21:35:56 2012 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | H | G | S | P | S | R | S | A | E | I | M | K | H | G | Y | P | G | F | T | N | V | R | T | Y | E | D | F | V | L | S | Y | D | Y | K | T | R | T | A | H | W | V | C | E | H | L | T | P | E | R | L | K | H | A | E | G | V | D | R | K | L | C | E | F | K | P | D | I | T | F | P |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | G | G | G | S | T | T | G | G | G | B | T | T | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | Q | K | F | L | S | Q | N | T | D | Y | K | C | S | G | F | D | R | G | H | L | A | A | A | G | N | H | R | K | S | Q | L | A | V | D | Q | T | F | Y | L | S | N | M | S | P | Q | V | G | R | G | F | N | R | D | K | W | N | D | L | E | M | H | C | R | R | V | A | K | K | M | I |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | G | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | S | S | G | G | G | S | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | B | G | G | G | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | N | S | Y | I | I | T | G | P | L | Y | L | P | K | L | E | G | D | G | K | K | Y | I | K | Y | Q | V | I | G | D | N | N | V | A | V | P | T | H | F | F | K | V | A | L | F | E | V | T | P | G | K | F | E | L | E | S | Y | I | L | P | N | A | V | I | E | D | T | V | E | I | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | T | T | S | G | G |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
Sequence | K | F | H | V | P | L | D | A | V | E | R | S | A | G | L | E | I | F | A | R | L | D | P | K | S | I | V | K | E | N | G | A | K | |||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | T | T | G | G | G | ![]() | ![]() | ![]() | ![]() | T | T | B |
Download: | PDB structure | FASTA sequence |
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