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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3rzeA_

Fold library idPDB HeaderMoleculeTitle
c3rzeA_PDB header: hydrolaseChain: A: PDB Molecule: histamine h1 receptor, lysozyme chimera;PDBTitle: structure of the human histamine h1 receptor in complex with doxepin


Added to library: Sat Jun 18 23:34:48 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGR
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Known secondary structure (DSSP)
GGGT
STT

GGGTSSS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNH
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Known secondary structure (DSSP)
S

TTTTSSGGG



 .........150.........160.........170.........180.........190.........200.........210
Sequence RREDKCETDFYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGY
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Known secondary structure (DSSP)

SSSS

S
TT
TS






TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence YTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAV
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Known secondary structure (DSSP) T
SS
SSTS

TTB

T
TTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHM
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Known secondary structure (DSSP)
TS
TT
TTSSSSSGGG
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence NRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKK
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Known secondary structure (DSSP) S

S
TTT
 ........
Sequence TFKRILHI
Predicted secondary structure

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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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