PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3rwaE_

Fold library id	PDB Header	Molecule	Title
c3rwaE_	PDB header: fluorescent protein	Chain: E: PDB Molecule: fluorescent protein fp480;	PDBTitle: crystal structure of circular-permutated mkate

Links to external resources
Added to library: Sat Jun 18 22:01:40 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G H L I C N L K T T Y R S K K P A K N L K M P G V Y Y V D R R L E R I K E A D K E T Y V E Q H E V A V A R Y C D L P S K L G H A G G T G G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G
S T T T T
S
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M S E L I T E N M H M K L Y M E G T V N N H H F K C T S E G E G K P Y E G T Q T M R I K V V E G G P L P F A F D I L A T S F S K T F I N H T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S T T T T T T S
S
S S
G G G G G G G
T T
B
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q G I P D F F K Q S F P E G F T W E R V T T Y E D G G V L T A T Q D T S L Q D G C L I Y N V K I R G V N F P S N G P V M Q K K T L G W E A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T T
T T S
T T
T T S T T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . .

Sequence T E M L Y P A D G G L E G R S D M A L K L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	H	L	I	C	N	L	K	T	T	Y	R	S	K	K	P	A	K	N	L	K	M	P	G	V	Y	Y	V	D	R	R	L	E	R	I	K	E	A	D	K	E	T	Y	V	E	Q	H	E	V	A	V	A	R	Y	C	D	L	P	S	K	L	G	H	A	G	G	T	G	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S		G	G	G						S														T	T	T	T															S			S	S						S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	S	E	L	I	T	E	N	M	H	M	K	L	Y	M	E	G	T	V	N	N	H	H	F	K	C	T	S	E	G	E	G	K	P	Y	E	G	T	Q	T	M	R	I	K	V	V	E	G	G	P	L	P	F	A	F	D	I	L	A	T	S	F	S	K	T	F	I	N	H	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S		S	S												T	T													T	T	T	T											S		S		S	S		G	G	G	G	G	G	G			T	T			B		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	G	I	P	D	F	F	K	Q	S	F	P	E	G	F	T	W	E	R	V	T	T	Y	E	D	G	G	V	L	T	A	T	Q	D	T	S	L	Q	D	G	C	L	I	Y	N	V	K	I	R	G	V	N	F	P	S	N	G	P	V	M	Q	K	K	T	L	G	W	E	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								T	T	T	T											T	T	S													T	T															T	T	S	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Sequence	T	E	M	L	Y	P	A	D	G	G	L	E	G	R	S	D	M	A	L	K	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T