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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3rw6A_

Fold library idPDB HeaderMoleculeTitle
c3rw6A_PDB header: transport protein/rnaChain: A: PDB Molecule: nuclear rna export factor 1;PDBTitle: structure of nuclear rna export factor tap bound to cte rna


Added to library: Wed Jan 9 23:14:54 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NWFKITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRI
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Known secondary structure (DSSP)

TTGGGS
T
SS



TTS
TTSS
B
TTS
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence SIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATL
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Known secondary structure (DSSP)





TS

TTTTT
TTGGG
TT



TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSL
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Known secondary structure (DSSP)
TT


TTS




GGGTTSTT


TTS


SGGGGGGGTTS

S
TTSTT
 .........220.........230.........240.....
Sequence CDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAF
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Known secondary structure (DSSP) GGG
SS
TT

SS
B







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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