PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3rqsB_

Fold library id	PDB Header	Molecule	Title
c3rqsB_	PDB header: oxidoreductase	Chain: B: PDB Molecule: hydroxyacyl-coenzyme a dehydrogenase, mitochondrial;	PDBTitle: crystal structure of human l-3- hydroxyacyl-coa dehydrogenase2 (ec1.1.1.35) from mitochondria at the resolution 2.0 a, northeast3 structural genomics consortium target hr487, mitochondrial protein4 partnership

Links to external resources
Added to library: Thu Jan 10 02:53:21 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S H X A F V T R Q F X R S V S S S S T A S A S A K K I I V K H V T V I G G G L X G A G I A Q V A A A T G H T V V L V D Q T E D I L A K S K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
S T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G I E E S L R K V A K K K F A E N P K A G D E F V E K T L S T I A T S T D A A S V V H S T D L V V E A I V E N L K V K N E L F K R L D K F A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T S
G G G T G G G
S
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A E H T I F A S N T S S L Q I T S I A N A T T R Q D R F A G L H F F N P V P V X K L V E V I K T P X T S Q K T F E S L V D F S K A L G K H P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S
T T S S
G G G
S S T T T
T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence V S C K D T P G F I V N R L L V P Y L X E A I R L Y E R G D A S K E D I D T A X K L G A G Y P X G P F E L L D Y V G L D T T K F I V D G W H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T T T T S S
S S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . .

Sequence E X D A E N P L H Q P S P S L N K L V A E N K F G K K T G E G F Y K Y K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
G G G
T T
B G G G T B S S S B

Download: PDB structure FASTA sequence
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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	H	X	A	F	V	T	R	Q	F	X	R	S	V	S	S	S	S	T	A	S	A	S	A	K	K	I	I	V	K	H	V	T	V	I	G	G	G	L	X	G	A	G	I	A	Q	V	A	A	A	T	G	H	T	V	V	L	V	D	Q	T	E	D	I	L	A	K	S	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	S																							S													T	T								S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	I	E	E	S	L	R	K	V	A	K	K	K	F	A	E	N	P	K	A	G	D	E	F	V	E	K	T	L	S	T	I	A	T	S	T	D	A	A	S	V	V	H	S	T	D	L	V	V	E	A	I	V	E	N	L	K	V	K	N	E	L	F	K	R	L	D	K	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T															T					S		G	G	G	T	G	G	G		S								S																S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	E	H	T	I	F	A	S	N	T	S	S	L	Q	I	T	S	I	A	N	A	T	T	R	Q	D	R	F	A	G	L	H	F	F	N	P	V	P	V	X	K	L	V	E	V	I	K	T	P	X	T	S	Q	K	T	F	E	S	L	V	D	F	S	K	A	L	G	K	H	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T								S	S	S							T	T	S	S		G	G	G								S	S	T	T	T										T	T																T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	S	C	K	D	T	P	G	F	I	V	N	R	L	L	V	P	Y	L	X	E	A	I	R	L	Y	E	R	G	D	A	S	K	E	D	I	D	T	A	X	K	L	G	A	G	Y	P	X	G	P	F	E	L	L	D	Y	V	G	L	D	T	T	K	F	I	V	D	G	W	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		T	T	T	T																		T	T	S	S																S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Sequence	E	X	D	A	E	N	P	L	H	Q	P	S	P	S	L	N	K	L	V	A	E	N	K	F	G	K	K	T	G	E	G	F	Y	K	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T		G	G	G												T	T			B	G	G	G	T	B	S	S	S	B