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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3rpwA_

Fold library idPDB HeaderMoleculeTitle
c3rpwA_PDB header: transport proteinChain: A: PDB Molecule: abc transporter;PDBTitle: the crystal structure of an abc transporter from rhodopseudomonas2 palustris cga009


Added to library: Sat May 14 09:09:30 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QSNVVIXQDPGGGYGDALRKVXYDPFEKETGIKVVTVQEARSGPRIKAQAEAGKAQWDLTFIFDQETKLL
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Known secondary structure (DSSP)

S

TS

S

T



SB
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence GDCCLADIDYSKLSESAHKTLAAXPDNLKRKKGVALQVIGVGLVYNKDKFKGDKAPQTWADFWDVKKFPG
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Known secondary structure (DSSP) B



GGGS
TS
GGGTTTTTS
TTSS

S
TTTS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RRCXPAWPRFTFEAALXADGVTKDKLYPIDXDRALKKLKEIKPHVVKWWTTAAQPPQLILDGEADXCLAY
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Known secondary structure (DSSP)
SSSTTTT

TTS

S

GGG
STTTTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence TGSXSKLALEGAPIDLTFNQGFVYYDFFSIPKGAPNYDNALKLLSWRLDPKRAAQLTSTFPVALPSKVVF
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Known secondary structure (DSSP) T
S
BTT
TTT
S

B
S
 .........290.........300.........310.........320.........330...
Sequence DAATDKNIARYWANNPENVAKAIEWSPDFWGAPSPAGNSTNEEYGQEKLNAXL
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Known secondary structure (DSSP)
S
GGGGGGSTTSS



SB
TTSSSB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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