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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3rmgB_

Fold library idPDB HeaderMoleculeTitle
c3rmgB_PDB header: transferaseChain: B: PDB Molecule: octaprenyl-diphosphate synthase;PDBTitle: crystal structure of geranylgeranyl pyrophosphate synthase from2 bacteroides thetaiotaomicron


Added to library: Sat May 14 09:03:13 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LDSISLIKTPIEAELEDFKALFDALLDSVITHIRKRNMMRPILVLLVARLYGAVTPATLHAAVSLELLHT
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Known secondary structure (DSSP)

GGG



TTS


 .........80.........90.........100.........110.........120.........130.........140
Sequence ASLVHDDVVAIFNNKVSVLAGDYLLATSLVHAEQTNNYEIIRLVSSLGQKLAEGELLQLSNVSNHSFSEE
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Known secondary structure (DSSP) GGG

TTT
TTTTTTT




 .........150.........160.........170.........180.........190.........200.........210
Sequence VYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYFDSKGKPTGNDMLEG
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Known secondary structure (DSSP) TTTT

TTS





TTTTGGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KLTLPALYALNTTDAWAEQIAFKVKEGTATPDEIVRLIEFTKDNGGIEYACRTIEQYKKKAFDLLAALPD
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Known secondary structure (DSSP)


TT


T


TTTTTTS

 .........290.......
Sequence SNICLALRTYLDYVVAR
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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