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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3rm5B_

Fold library idPDB HeaderMoleculeTitle
c3rm5B_PDB header: transferaseChain: B: PDB Molecule: hydroxymethylpyrimidine/phosphomethylpyrimidine kinasePDBTitle: structure of trifunctional thi20 from yeast


Added to library: Sat Sep 24 10:18:18 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TYSTVSINTPPPYLTLACNEKLPTVLSIAGTDPSGGAGIEADVKTITAHRCYAMTCITALNAQTPVKVYS
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TTGGGGTT






TTSSSTT
SB


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence INNTPKEVVFQTLESNLKDMKCNVIKTGMLTAAAIEVLHEKLLQLGENRPKLVVDPVLVAKDIVSLITEK
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Known secondary structure (DSSP)

B

S

S
S

GGG








 .........150.........160.........170.........180.........190.........200.........210
Sequence VAPFADILTPNIPECYKLLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHITDVLFLGAEQKFIIFK
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Known secondary structure (DSSP) TGGG
S

BTTS



SS

S


TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GNFVNTTHTHGTGCTLASAIASNLARGYSLPQSVYGGIEYVQNAVAIGCDVTKETVKNGPINHVYAVEIP
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Known secondary structure (DSSP)





S

BTT





S
TTT


B

TTTT


 .........290.........300.........310.........320.........330.........340.........350
Sequence LEKMLSDECFTASDVIPGGNFYEYLINHPKVKPHWDSYINHEFVKKVADGTLERKKFQFFIEQDYAYLVD
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Known secondary structure (DSSP) S
TT



SS




TSTTTT
TS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence YARVHCIAGSKAPCLEDMEKELVIVGGVRTEMGQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDV
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Known secondary structure (DSSP)
SSSS



GGGTTS



 .........430.........440.........450.........460.........470.........480.........490
Sequence SRRGNWQELVASLTPCLMGYGEALTKMKGKVTAPEGSVYHEWCETYASSWYREAMDEGEKLLNHILETYP
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Known secondary structure (DSSP) S
TTSS


S
TTSTTSTTTTS
 .........500.........510.........
Sequence PEQLDTLVTIYAEVCELETNFWTAALEYE
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Known secondary structure (DSSP) GGGTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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