PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3rkrC_

Fold library id	PDB Header	Molecule	Title
c3rkrC_	PDB header: oxidoreductase	Chain: C: PDB Molecule: short chain oxidoreductase;	PDBTitle: crystal structure of a metagenomic short-chain oxidoreductase (sdr) in2 complex with nadp

Links to external resources
Added to library: Sat Dec 3 18:14:01 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S S L S G Q V A V V T G A S R G I G A A I A R K L G S L G A R V V L T A R D V E K L R A V E R E I V A A G G E A E S H A C D L S H S D A I A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S
S S T T
S S G G G G T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A F A T G V L A A H G R C D V L V N N A G V G W F G G P L H T M K P A E W D A L I A V N L K A P Y L L L R A F A P A M I A A K R G H I I N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
G G G S
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S S L A G K N P V A D G A A Y T A S K W G L N G L M T S A A E E L R Q H Q V R V S L V A P G S V R A L G A I E P D D I A D V V A L L A T Q A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S
T T
G G G T
T T
T

. . . . . . . . . 220 . . . .

Sequence D Q S F I S E V L V R P T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	S	L	S	G	Q	V	A	V	V	T	G	A	S	R	G	I	G	A	A	I	A	R	K	L	G	S	L	G	A	R	V	V	L	T	A	R	D	V	E	K	L	R	A	V	E	R	E	I	V	A	A	G	G	E	A	E	S	H	A	C	D	L	S	H	S	D	A	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T							S		S	S													T	T								S	S	G	G	G	G										T	T										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	F	A	T	G	V	L	A	A	H	G	R	C	D	V	L	V	N	N	A	G	V	G	W	F	G	G	P	L	H	T	M	K	P	A	E	W	D	A	L	I	A	V	N	L	K	A	P	Y	L	L	L	R	A	F	A	P	A	M	I	A	A	K	R	G	H	I	I	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S															S	S		G	G	G	S													T																	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	S	L	A	G	K	N	P	V	A	D	G	A	A	Y	T	A	S	K	W	G	L	N	G	L	M	T	S	A	A	E	E	L	R	Q	H	Q	V	R	V	S	L	V	A	P	G	S	V	R	A	L	G	A	I	E	P	D	D	I	A	D	V	V	A	L	L	A	T	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			S	S	S			T	T																							G	G	G	T															T	T															T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Sequence	D	Q	S	F	I	S	E	V	L	V	R	P	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T