PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3rjvA_

Fold library id	PDB Header	Molecule	Title
c3rjvA_	PDB header: protein binding	Chain: A: PDB Molecule: putative sel1 repeat protein;	PDBTitle: crystal structure of a putative sel1 repeat protein (kpn_04481) from2 klebsiella pneumoniae subsp. pneumoniae mgh 78578 at 1.65 a3 resolution

Links to external resources
Added to library: Sat May 7 08:58:07 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E P G S Q Y Q Q Q A E A G D R R A Q Y Y L A D T W V S S G D Y Q K A E Y W A Q K A A A Q G D G D A L A L L A Q L K I R N P Q Q A D Y P Q A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T
T T
T T S S T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q L A E K A V E A G S K S G E I V L A R V L V N R Q A G A T D V A H A I T L L Q D A A R D S E S D A A V D A Q X L L G L I Y A S G V H G P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T
G G G S S
T S S T T S T S S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . .

Sequence D D V K A S E Y F K G S S S L S R T G Y A E Y W A G X X F Q Q G E K G F I E P N K Q K A L H W L N V S C L E G F D T G C E E F D R I S K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
T T
B T T T B
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	P	G	S	Q	Y	Q	Q	Q	A	E	A	G	D	R	R	A	Q	Y	Y	L	A	D	T	W	V	S	S	G	D	Y	Q	K	A	E	Y	W	A	Q	K	A	A	A	Q	G	D	G	D	A	L	A	L	L	A	Q	L	K	I	R	N	P	Q	Q	A	D	Y	P	Q	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T									T	T																T															T	T												T	T	S	S	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	L	A	E	K	A	V	E	A	G	S	K	S	G	E	I	V	L	A	R	V	L	V	N	R	Q	A	G	A	T	D	V	A	H	A	I	T	L	L	Q	D	A	A	R	D	S	E	S	D	A	A	V	D	A	Q	X	L	L	G	L	I	Y	A	S	G	V	H	G	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T													T		G	G	G	S	S														T	S	S	T	T	S																	T	S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Sequence	D	D	V	K	A	S	E	Y	F	K	G	S	S	S	L	S	R	T	G	Y	A	E	Y	W	A	G	X	X	F	Q	Q	G	E	K	G	F	I	E	P	N	K	Q	K	A	L	H	W	L	N	V	S	C	L	E	G	F	D	T	G	C	E	E	F	D	R	I	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	S		T	T														B	T	T	T	B																		T