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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3rjqA_

Fold library idPDB HeaderMoleculeTitle
c3rjqA_PDB header: viral protein/immune systemChain: A: PDB Molecule: c186 gp120;PDBTitle: crystal structure of anti-hiv llama vhh antibody a12 in complex with2 c186 gp120


Added to library: Wed Jan 9 17:10:50 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPNPQEMVLANVTENFNMWKNDMVEQMHEDIISLWDE
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Known secondary structure (DSSP)








SS





SS



SS

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLKVSFDPIPLHYCAPAGFAILKCNNKTFNGTGPCRNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIRS
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B

TT

TT

SS
SB


B



BBSS



SSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence ENLTNNAKTIIVHLNESVNIVCTRAHCNINESKWNNTLQKVGEELAKHFPSKTIKFEPSSGGDLEITTHS
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Known secondary structure (DSSP) S
TT
TTS
B


S
S
BB



SS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence FNCRGEFFYCNTSDLFNGTYRNGTYNHTGTITLQCKIKQTCNSNITGLLLLRDGDTETFRPGGGDMRDNW
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Known secondary structure (DSSP) TT

TTTT
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B


B

T
 .........290..
Sequence RSELYKYKVVEI
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Known secondary structure (DSSP) TTSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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