PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3riuC_

Fold library id	PDB Header	Molecule	Title
c3riuC_	PDB header: hydrolase	Chain: C: PDB Molecule: translin associated factor x, isoform b;	PDBTitle: crystal structure of drosophila hexameric c3po formed by truncated2 translin and trax

Links to external resources
Added to library: Sat May 14 08:58:20 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V Q Q F R I Y S N E L I X K H D R H E R I V K L S R D I T I E S K R I I F L L H S I N K E K V L E E A R Q R L N K L I A V N F R A V A L E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V Y Q F R S S Y S P G L Q E F I E A Y T Y X E Y L C H E T K S V S D W Q A I Q A V X Q Y V E F F V D P T E Y I L G L S D L T G E L X R R C I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G G G G T T
S
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190

Sequence N S L D T C L D T C K A L Q H F Y S G Y I S L N C E L W R K I T T X K Q S V L K A E N V C Y N V K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	Q	Q	F	R	I	Y	S	N	E	L	I	X	K	H	D	R	H	E	R	I	V	K	L	S	R	D	I	T	I	E	S	K	R	I	I	F	L	L	H	S	I	N	K	E	K	V	L	E	E	A	R	Q	R	L	N	K	L	I	A	V	N	F	R	A	V	A	L	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																																				T	T					S																							T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	Y	Q	F	R	S	S	Y	S	P	G	L	Q	E	F	I	E	A	Y	T	Y	X	E	Y	L	C	H	E	T	K	S	V	S	D	W	Q	A	I	Q	A	V	X	Q	Y	V	E	F	F	V	D	P	T	E	Y	I	L	G	L	S	D	L	T	G	E	L	X	R	R	C	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	G	G	G	G																	T	T						S											T	T							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Sequence	N	S	L	D	T	C	L	D	T	C	K	A	L	Q	H	F	Y	S	G	Y	I	S	L	N	C	E	L	W	R	K	I	T	T	X	K	Q	S	V	L	K	A	E	N	V	C	Y	N	V	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	T	S	S