Fold library entry viewer: c3rimA_

Added to library: Sat Mar 3 11:49:06 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	I	S	A	L	T	R	P	R	H	P	D	Y	W	T	E	I	D	S	A	A	V	D	T	I	R	V	L	A	A	D	A	V	Q	K	V	G	N	G	H	P	G	T	A	M	S	L	A	P	L	A	Y	T	L	F	Q	R	T	M	R	H	D	P	S	D	T	H	W	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T						T	T																								T		S								T										T	T					T	T		T	T		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	D	R	F	V	L	S	A	G	H	S	S	L	T	L	Y	I	Q	L	Y	L	G	G	F	G	L	E	L	S	D	I	E	S	L	R	T	W	G	S	K	T	P	G	H	P	E	F	R	H	T	P	G	V	E	I	T	T	G	P	L	G	Q	G	L	A	S	A	V	G	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	T	T												T	T	S	S							T	T	T	T	S	T	T		S			S	S			B	T	T	B	T	T			S				S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	M	A	S	R	Y	E	R	G	L	F	D	P	D	A	E	P	G	A	S	P	F	D	H	Y	I	Y	V	I	A	S	D	G	D	I	E	E	G	V	T	S	E	A	S	S	L	A	A	V	Q	Q	L	G	N	L	I	V	F	Y	D	R	N	Q	I	S	I	E	D	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S		T	T		S	T	T															S													T	T		T	T									S			T	T			G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	I	A	L	C	E	D	T	A	A	R	Y	R	A	Y	G	W	H	V	Q	E	V	E	G	G	E	N	V	V	G	I	E	E	A	I	A	N	A	Q	A	V	T	D	R	P	S	F	I	A	L	R	T	V	I	G	Y	P	A	P	N	L	M	D	T	G	K	A	H	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T													T									T	T																	S	S										T	T	T	T		T	T	T	T	T	S						S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	L	G	D	D	E	V	A	A	V	K	K	I	V	G	F	D	P	D	K	T	F	Q	V	R	E	D	V	L	T	H	T	R	G	L	V	A	R	G	K	Q	A	H	E	R	W	Q	L	E	F	D	A	W	A	R	R	E	P	E	R	K	A	L	L	D	R	L	L	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T			T	T		S	S											T																																				T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	L	P	D	G	W	D	A	D	L	P	H	W	E	P	G	S	K	A	L	A	T	R	A	A	S	G	A	V	L	S	A	L	G	P	K	L	P	E	L	W	G	G	S	A	D	L	A	G	S	N	N	T	T	I	K	G	A	D	S	F	G	P	P	S	I	S	T	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T	S	S						T	T	S	S																T	T	T		T	T						S	S						T		S		T	T					S		G	G	G			S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	T	A	H	W	Y	G	R	T	L	H	F	G	V	R	E	H	A	M	G	A	I	L	S	G	I	V	L	H	G	P	T	R	A	Y	G	G	T	F	L	Q	F	S	D	Y	M	R	P	A	V	R	L	A	A	L	M	D	I	D	T	I	Y	V	W	T	H	D	S	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T								S																S	S									G	G	G	G	G	G	G											T											S	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	G	E	D	G	P	T	H	Q	P	I	E	H	L	S	A	L	R	A	I	P	R	L	S	V	V	R	P	A	D	A	N	E	T	A	Y	A	W	R	T	I	L	A	R	R	N	G	S	G	P	V	G	L	I	L	T	R	Q	G	V	P	V	L	D	G	T	D	A	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G		T	T		T	T	T	S		S	S							T	S	T	T							S	S													T	T	T	T		S	S								S	S						T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	A	R	G	G	Y	V	L	S	D	A	G	G	L	Q	P	G	E	E	P	D	V	I	L	I	A	T	G	S	E	V	Q	L	A	V	A	A	Q	T	L	L	A	D	N	D	I	L	A	R	V	V	S	M	P	C	L	E	W	F	E	A	Q	P	Y	E	Y	R	D	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S								S				T	T				S							G	G	G													T	T	T									S								S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
Sequence	L	P	P	T	V	S	A	R	V	A	V	E	A	G	V	A	Q	C	W	H	Q	L	V	G	D	T	G	E	I	V	S	I	E	H	Y	G	E	S	A	D	H	K	T	L	F	R	E	Y	G	F	T	A	E	A	V	A	A	A	A	E	R	A	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T									S	S		S	G	G	G						T	T								S				S	S									T	T		S

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PDB structure

FASTA sequence

Hidden Markov model

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