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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3riaC_

Fold library idPDB HeaderMoleculeTitle
c3riaC_PDB header: transport protein/immune systemChain: C: PDB Molecule: avermectin-sensitive glutamate-gated chloride channel gluclPDBTitle: c. elegans glutamate-gated chloride channel (glucl) in complex with2 fab, ivermectin and iodide.


Added to library: Sat May 28 09:11:44 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKG
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Known secondary structure (DSSP)
S


TTS



SSS

TTTT
GGG
SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMD
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Known secondary structure (DSSP) SSS
S

TT







TT

SSS
STTS




TTGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence VQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLK
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Known secondary structure (DSSP) SS

TTT
SS
S
TTSGGG

S


SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence REFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWI
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Known secondary structure (DSSP)
STTTTTS
TT
TS


SS

 .........290.........300.........310.........320.........330.........
Sequence GACMTFIFCALLEFALVNHIANAGTTEWNDISKRVDLISRALFPVLFFVFNILYWSRFG
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Known secondary structure (DSSP) SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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