PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3rfrK_

Fold library id	PDB Header	Molecule	Title
c3rfrK_	PDB header: oxidoreductase	Chain: K: PDB Molecule: pmoc;	PDBTitle: crystal structure of particulate methane monooxygenase (pmmo) from2 methylocystis sp. strain m

Links to external resources
Added to library: Wed Jan 9 23:03:45 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E S V V D L R G M W I G L A V L N V F Y L I V R I Y E Q V F G W R A G L D S F A P E F Q T Y W M S I L W T E I P L E L V S G L G L A G Y L W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T S S
T T S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K T R D R N V D A V A P R E E M R R L V V L V Q W L V V Y G I A I Y W G A S F F T E Q D G A W H M T V I R D T D F T P S H I I E F Y M S Y P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T G G G
T T T T
S S S
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I Y S V I A V G A F F Y A K T R I P Y F A H G Y S L A F L I V A I G P F M I I P N V F G W M A L G V F G V V L Q I L G R I H A L I G K E G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S B T T B T T
G G G G
S
T S
S
T T

.

Sequence A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) -

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	S	V	V	D	L	R	G	M	W	I	G	L	A	V	L	N	V	F	Y	L	I	V	R	I	Y	E	Q	V	F	G	W	R	A	G	L	D	S	F	A	P	E	F	Q	T	Y	W	M	S	I	L	W	T	E	I	P	L	E	L	V	S	G	L	G	L	A	G	Y	L	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																													T	T	T	S	S		T	T	S							T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	T	R	D	R	N	V	D	A	V	A	P	R	E	E	M	R	R	L	V	V	L	V	Q	W	L	V	V	Y	G	I	A	I	Y	W	G	A	S	F	F	T	E	Q	D	G	A	W	H	M	T	V	I	R	D	T	D	F	T	P	S	H	I	I	E	F	Y	M	S	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T			T	T	G	G	G																													T										T	T	T				S	S	S									T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	Y	S	V	I	A	V	G	A	F	F	Y	A	K	T	R	I	P	Y	F	A	H	G	Y	S	L	A	F	L	I	V	A	I	G	P	F	M	I	I	P	N	V	F	G	W	M	A	L	G	V	F	G	V	V	L	Q	I	L	G	R	I	H	A	L	I	G	K	E	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	B	T	T	B	T	T											G	G	G	G										S		T															S		S		T	T
	.
Sequence	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	-