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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3rfaB_

Fold library idPDB HeaderMoleculeTitle
c3rfaB_PDB header: oxidoreductaseChain: B: PDB Molecule: ribosomal rna large subunit methyltransferase n;PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine


Added to library: Wed Jan 9 22:26:37 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQ
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Known secondary structure (DSSP)
GGG

TT

TS



GGG
TTS




 .........80.........90.........100.........110.........120.........130.........140
Sequence RSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAA
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Known secondary structure (DSSP)
TTS
TT
SS




SS

TT
GGGGT


 .........150.........160.........170.........180.........190.........200.........210
Sequence KIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI
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Known secondary structure (DSSP)

SS
S
S
SSS
GGG

TTTT


GGGS


 .........220.........230.........240.........250.........260.........270.........280
Sequence DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLA
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Known secondary structure (DSSP)




SSSGGGGTS


TTTT
BTTTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAAGQLAGDVIDRTK
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Known secondary structure (DSSP) TTTS




TT
S

B

TT





TTS




SS

TT
 ........
Sequence RTLRKRMQ
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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