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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3renB_

Fold library idPDB HeaderMoleculeTitle
c3renB_PDB header: hydrolaseChain: B: PDB Molecule: glycosyl hydrolase, family 8;PDBTitle: cpf_2247, a novel alpha-amylase from clostridium perfringens


Added to library: Sat May 21 09:04:58 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VPRGSHXEEKXLFDFIEKDLSKSGYGIYTNYIDKSDITKGHSVLSESEGLXXLYSVNANNKELFDEHFDI
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Known secondary structure (DSSP)


STTTTTBS
SSS





TT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VKEXRLKNGLISWRKEGDENSPSSATIDELRIIKALLLANNRWNSFYYKFYAINIANSLLKHAEENETLV
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Known secondary structure (DSSP) TB
TTSSB
STT
S


TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DYIDNYGKGNTTTLCYLDLPTXKLLSQVDKKWEGIYEKSNSIIENGKISEEVPLYRKVFYEETQKYDEEE
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Known secondary structure (DSSP) S
SS
B
SGGG

TT
TTTB

SSS

B
STTTT


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NVDFLLSTIVILNRIEAGENEESSIKWIKEKFKKDGFLVATYNGKNGDATSQIESPSIYSNVALIANYIG
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Known secondary structure (DSSP) TT


SS

STTT

B





T
 .........290.........300.........310.........320.........330..
Sequence DKELFNKAIDKLKYYQIKNKDSVLYGGFGDEKTNSVYSFDNLNALLAFQKYK
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Known secondary structure (DSSP)
S


TTSTTTTS
SBTTTTB

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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