PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3r0bC_

Fold library id	PDB Header	Molecule	Title
c3r0bC_	PDB header: hydrolase	Chain: C: PDB Molecule: yav vp4;	PDBTitle: crystal structure of yellowtail ascites virus vp4 protease with a2 wild-type active site reveals acyl-enzyme complexes and product3 complexes.

Links to external resources
Added to library: Sat Mar 24 12:04:39 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G R F S R N L K D R L E S N N Y E E M E L P P P T K G V I I P V V H T V E S A P G E A F G S L L V I I P G A Y P E L L D P N Q Q V L S H F K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S B
T T S T T S
G G G S
G G G
B G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N D T G C V W G I G E D I P F E G D D I C Y T A L P L K E I K K D G N I V V E K V F A G P A M G P S Q L G L S L L V N D I D K G V P R M V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G S
T B
S
B S S
S
T T S
S S
B
S
T
S B
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . .

Sequence T G E I A N D E E T I V P I C G V D I K A I A A H E H G L P L V G C Q P G V D E V V A N T S L A S H L I Q S G A L P V Q K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S B
S
T T T
S S T T
S
S B T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	R	F	S	R	N	L	K	D	R	L	E	S	N	N	Y	E	E	M	E	L	P	P	P	T	K	G	V	I	I	P	V	V	H	T	V	E	S	A	P	G	E	A	F	G	S	L	L	V	I	I	P	G	A	Y	P	E	L	L	D	P	N	Q	Q	V	L	S	H	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T											S	B											T	T	S	T	T												S			G	G	G	S		G	G	G						B	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	D	T	G	C	V	W	G	I	G	E	D	I	P	F	E	G	D	D	I	C	Y	T	A	L	P	L	K	E	I	K	K	D	G	N	I	V	V	E	K	V	F	A	G	P	A	M	G	P	S	Q	L	G	L	S	L	L	V	N	D	I	D	K	G	V	P	R	M	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S					T	B		S		B	S	S				S													T	T	S								S	S			B		S												T			S	B			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Sequence	T	G	E	I	A	N	D	E	E	T	I	V	P	I	C	G	V	D	I	K	A	I	A	A	H	E	H	G	L	P	L	V	G	C	Q	P	G	V	D	E	V	V	A	N	T	S	L	A	S	H	L	I	Q	S	G	A	L	P	V	Q	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	S	B					S											T	T	T						S	S	T	T		S				S	B											T	S