PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3qyqC_

Fold library id	PDB Header	Molecule	Title
c3qyqC_	PDB header: lyase	Chain: C: PDB Molecule: deoxyribose-phosphate aldolase, putative;	PDBTitle: 1.8 angstrom resolution crystal structure of a putative deoxyribose-2 phosphate aldolase from toxoplasma gondii me49

Links to external resources
Added to library: Sat Apr 2 08:47:20 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y F Q G I Y K Q F T S R T L L N F F E V A A L T D G E T N E S V A A V C K I A A K D P A I V G V S V R P A F V R F I R Q E L V K S A P E V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T
S S S
S
G G G T
G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G I K V C A A V N F P E G T G T P D T V S L E A V G A L K D G A D E I E C L I D W R R M N E N V A D G E S R I R L L V S E V K K V V G P K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G S S T T T
T T
S
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L K V V L S G G E L Q G G D I I S R A A V A A L E G G A D F L Q T S S G L G A T H A T M F T V H L I S I A L R E Y M V R E N E R I R V E G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S S S T
S S
S S S S
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . .

Sequence N R C I G I K I E V G D V H M A E T A D F L M Q M I F E N G P R S I V R D K F R V G G G F N L L K E L R D C Y E S W D S V G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
G G G
S T T T
T S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	F	Q	G	I	Y	K	Q	F	T	S	R	T	L	L	N	F	F	E	V	A	A	L	T	D	G	E	T	N	E	S	V	A	A	V	C	K	I	A	A	K	D	P	A	I	V	G	V	S	V	R	P	A	F	V	R	F	I	R	Q	E	L	V	K	S	A	P	E	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																				S	T	T															S	S	S			S						G	G	G							T						G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	I	K	V	C	A	A	V	N	F	P	E	G	T	G	T	P	D	T	V	S	L	E	A	V	G	A	L	K	D	G	A	D	E	I	E	C	L	I	D	W	R	R	M	N	E	N	V	A	D	G	E	S	R	I	R	L	L	V	S	E	V	K	K	V	V	G	P	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S							S	T	T	T																		T	T		S																																		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	K	V	V	L	S	G	G	E	L	Q	G	G	D	I	I	S	R	A	A	V	A	A	L	E	G	G	A	D	F	L	Q	T	S	S	G	L	G	A	T	H	A	T	M	F	T	V	H	L	I	S	I	A	L	R	E	Y	M	V	R	E	N	E	R	I	R	V	E	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	S	S	S															T		S				S			S	S	S	S																														T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Sequence	N	R	C	I	G	I	K	I	E	V	G	D	V	H	M	A	E	T	A	D	F	L	M	Q	M	I	F	E	N	G	P	R	S	I	V	R	D	K	F	R	V	G	G	G	F	N	L	L	K	E	L	R	D	C	Y	E	S	W	D	S	V	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T																			G	G	G		S	T	T	T																			T	S			T	T