PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3qxlB_

Fold library id	PDB Header	Molecule	Title
c3qxlB_	PDB header: signaling protein	Chain: B: PDB Molecule: ras-specific guanine nucleotide-releasing factor ralgps1;	PDBTitle: crystal structure of the cdc25 domain from ral-specific guanine-2 nucleotide exchange factor ralgps1a

Links to external resources
Added to library: Sat May 14 09:01:02 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F D V L K V T P E E F A S Q I T L M D I P V F K A I Q P E E L A S C G W S K K E K H S L A P N V V A F T R R F N Q V S F W V V R E I L T A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
T T
T T S T T
T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T L K I R A E I L S H F V K I A K K L L E L N N L H S L M S V V S A L Q S A P I F R L T K T W A L L N R K D K T T F E K L D Y L M S K E D N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T B T S T
T S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y K R T R E Y I R S L K M V P S I P Y L G I Y L L D L I Y I D S A Y P A S G S I M E N E Q R S N Q M N N I L R I I A D L Q V S C S Y H L T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S
B
T S
T T S
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . .

Sequence L P H V Q K Y L K S V R Y I E E L Q K F V E D D N Y K L S L R I E P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	D	V	L	K	V	T	P	E	E	F	A	S	Q	I	T	L	M	D	I	P	V	F	K	A	I	Q	P	E	E	L	A	S	C	G	W	S	K	K	E	K	H	S	L	A	P	N	V	V	A	F	T	R	R	F	N	Q	V	S	F	W	V	V	R	E	I	L	T	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	S																											T	T		T	T	S	T	T																												T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	L	K	I	R	A	E	I	L	S	H	F	V	K	I	A	K	K	L	L	E	L	N	N	L	H	S	L	M	S	V	V	S	A	L	Q	S	A	P	I	F	R	L	T	K	T	W	A	L	L	N	R	K	D	K	T	T	F	E	K	L	D	Y	L	M	S	K	E	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																					T	T	B												T	S					T							T	S															T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	K	R	T	R	E	Y	I	R	S	L	K	M	V	P	S	I	P	Y	L	G	I	Y	L	L	D	L	I	Y	I	D	S	A	Y	P	A	S	G	S	I	M	E	N	E	Q	R	S	N	Q	M	N	N	I	L	R	I	I	A	D	L	Q	V	S	C	S	Y	H	L	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T	T	S			B			T														S		T	T	S																									T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Sequence	L	P	H	V	Q	K	Y	L	K	S	V	R	Y	I	E	E	L	Q	K	F	V	E	D	D	N	Y	K	L	S	L	R	I	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S				G	G	G