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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3qvcA_

Fold library idPDB HeaderMoleculeTitle
c3qvcA_PDB header: hydrolaseChain: A: PDB Molecule: histo-aspartic protease;PDBTitle: crystal structure of histo-aspartic protease (hap) zymogen from2 plasmodium falciparum


Added to library: Wed Jan 9 21:03:47 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KYSTVGFNIENSYDRLMKTIKEHKLKNYIKESVKLFNKGLTKKDNVELKDLANVLSFGEAKLGDNGQKFN
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Known secondary structure (DSSP)


TT
TT







GGGGB
TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPY
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Known secondary structure (DSSP) SSB
SBTT

SGGGTTS

B
GGG
TT

SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KFIEMTEIVGFEPFYSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTI
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Known secondary structure (DSSP)
TTS



SSB
SSSS



TTSSSSS

TT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GGIEERFFDGPLNYEKLNHDLMWQVDLDVHFGNVSSKKANVILDSATSVITVPTEFFNQFVESASVFKVP
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Known secondary structure (DSSP) SS

GGG
SSTTSSTT
TTBSS
TTTT

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence FLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYF
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Known secondary structure (DSSP) TSS
TT
TT


TT

TTTSTT



STT
 .........360........
Sequence TVYDYDNHTVGFALAKNL
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Known secondary structure (DSSP) TTTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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