PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3qsgA_

Fold library id	PDB Header	Molecule	Title
c3qsgA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: nad-binding phosphogluconate dehydrogenase-like protein;	PDBTitle: crystal structure of nad-binding phosphogluconate dehydrogenase-like2 protein from alicyclobacillus acidocaldarius

Links to external resources
Added to library: Sat Apr 16 08:55:38 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X K L G F I G F G E A A S A I A S G L R Q A G A I D X A A Y D A A S A E S W R P R A E E L G V S C K A S V A E V A G E C D V I F S L V T A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
T T
S
S
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A A L E V A Q Q A G P H L C E G A L Y A D F T S C S P A V K R A I G D V I S R H R P S A Q Y A A V A V X S A V K P H G H R V P L V V D G D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T G G G
T T
T T
S
S T T T G G G S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A R R F Q A A F T L Y G C R I E V L D G E V G G A A L L K X C R S A V L K G L E A L F L E A L A A A E K X G L A D R V L A S L D A S F P E H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S T T T T T
S G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence H L R D L A L Y L V E R N L E H A D R R A H E L G E V A A T L C S V G V E P L V A E A G Y R R L T R V A Q V R A A L K Q R P G D V R A W L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S
S S

. . . . .

Sequence S L A N A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	K	L	G	F	I	G	F	G	E	A	A	S	A	I	A	S	G	L	R	Q	A	G	A	I	D	X	A	A	Y	D	A	A	S	A	E	S	W	R	P	R	A	E	E	L	G	V	S	C	K	A	S	V	A	E	V	A	G	E	C	D	V	I	F	S	L	V	T	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S														S									S	S												T	T					S										S						S		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	L	E	V	A	Q	Q	A	G	P	H	L	C	E	G	A	L	Y	A	D	F	T	S	C	S	P	A	V	K	R	A	I	G	D	V	I	S	R	H	R	P	S	A	Q	Y	A	A	V	A	V	X	S	A	V	K	P	H	G	H	R	V	P	L	V	V	D	G	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									G	G	G			T	T																										T	T										S		S	T	T	T	G	G	G	S						S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	R	R	F	Q	A	A	F	T	L	Y	G	C	R	I	E	V	L	D	G	E	V	G	G	A	A	L	L	K	X	C	R	S	A	V	L	K	G	L	E	A	L	F	L	E	A	L	A	A	A	E	K	X	G	L	A	D	R	V	L	A	S	L	D	A	S	F	P	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T								S	S	T	T																													T	T	T													S	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	L	R	D	L	A	L	Y	L	V	E	R	N	L	E	H	A	D	R	R	A	H	E	L	G	E	V	A	A	T	L	C	S	V	G	V	E	P	L	V	A	E	A	G	Y	R	R	L	T	R	V	A	Q	V	R	A	A	L	K	Q	R	P	G	D	V	R	A	W	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																																	T	T																								S	S			S	S
	.	.	.	.	.
Sequence	S	L	A	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)