PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3qrqA_

Fold library id	PDB Header	Molecule	Title
c3qrqA_	PDB header: rna binding protein/rna	Chain: A: PDB Molecule: putative uncharacterized protein tthb192;	PDBTitle: structure of thermus thermophilus cse3 bound to an rna representing a2 pre-cleavage complex

Links to external resources
Added to library: Sat May 28 09:18:51 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F Q M W L T K L V L N P A S R A A R R D L A N P Y E M H R T L S K A V S R A L E E G R E R L L W R L E P A R G L E P P V V L V Q T L T E P D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T T T T
S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence W S V L D E G Y A Q V F P P K P F H P A L K P G Q R L R F R L R A N P A K R L A A T G K R V A L K T P A E K V A W L E R R L E E G G F R L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G S
T T S
T T
T T T S
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . .

Sequence E G E R G P W V Q I L Q D T F L E V R R L L Q V Q A V L F E G R L E V V D P E R A L A T L R R G V G P G K A L G L G L L S V A P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S
S S S
G G G T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	Q	M	W	L	T	K	L	V	L	N	P	A	S	R	A	A	R	R	D	L	A	N	P	Y	E	M	H	R	T	L	S	K	A	V	S	R	A	L	E	E	G	R	E	R	L	L	W	R	L	E	P	A	R	G	L	E	P	P	V	V	L	V	Q	T	L	T	E	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T																			T	T	T	T						T	T													S	S										S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	S	V	L	D	E	G	Y	A	Q	V	F	P	P	K	P	F	H	P	A	L	K	P	G	Q	R	L	R	F	R	L	R	A	N	P	A	K	R	L	A	A	T	G	K	R	V	A	L	K	T	P	A	E	K	V	A	W	L	E	R	R	L	E	E	G	G	F	R	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	S		T	T	S															T	T																T	T	T	S							S															T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Sequence	E	G	E	R	G	P	W	V	Q	I	L	Q	D	T	F	L	E	V	R	R	L	L	Q	V	Q	A	V	L	F	E	G	R	L	E	V	V	D	P	E	R	A	L	A	T	L	R	R	G	V	G	P	G	K	A	L	G	L	G	L	L	S	V	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			S																													S													S	S	S		G	G	G	T