PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3qqzA_

Fold library id	PDB Header	Molecule	Title
c3qqzA_	PDB header: metal binding protein	Chain: A: PDB Molecule: putative uncharacterized protein yjik;	PDBTitle: crystal structure of the c-terminal domain of the yjik protein from2 escherichia coli cft073

Links to external resources
Added to library: Sat Mar 12 08:48:26 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S F Q N Y H A T I D G K E I A G I T N N I S S L T W S A Q S N T L F S T I N K P A A I V E X T T N G D L I R T I P L D F V K D L E T I E Y I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S
T T T T T T T T
S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G D N Q F V I S D E R D Y A I Y V I S L T P N S E V K I L K K I K I P L Q E S P T N C G F E G L A Y S R Q D H T F W F F K E K N P I E V Y K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T T T T
T T
S S
S S
T T T T S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V N G L L S S N E L H I S K D K A L Q R Q F T L D D V S G A E F N Q Q K N T L L V L S H E S R A L Q E V T L V G E V I G E X S L T K G S R G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
S S
T
S S
T T T T T T T T
T T
S T T G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . .

Sequence L S H N I K Q A E G V A X D A S G N I Y I V S E P N R F Y R F T P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
T T
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	F	Q	N	Y	H	A	T	I	D	G	K	E	I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	X	T	T	N	G	D	L	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T											T	T			S									T	T	T	T								T	T								T	T										S	S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	E	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T							T	T	T	T									T	T														S	S				S	S									T	T	T	T								S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	K	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	X	S	L	T	K	G	S	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T		S	S													T			S	S									T	T	T	T							T	T	T	T							T	T										S	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Sequence	L	S	H	N	I	K	Q	A	E	G	V	A	X	D	A	S	G	N	I	Y	I	V	S	E	P	N	R	F	Y	R	F	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S				S								T	T								T	T	T