Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3qqyA_

Fold library idPDB HeaderMoleculeTitle
c3qqyA_PDB header: hydrolase/dnaChain: A: PDB Molecule: ribosomal protein 3/homing endonuclease-like proteinPDBTitle: crystal structure of a novel laglidadg homing endonuclease, i-onui2 (from ophiostoma novo-ulmi subsp. americana)


Added to library: Sat Jul 23 09:44:30 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AYMSRRESINPWILTGFADAEGSFLLRIRNNNKSSVGYSTELGFQITLHNKDKSILENIQSTWKVGVIAN
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)

TTSS



S

TTSTTSGGGS

 .........80.........90.........100.........110.........120.........130.........140
Sequence SGDNAVSLKVTRFEDLKVIIDHFEKYPLITQKLGDYMLFKQAFCVMENKEHLKINGIKELVRIKAKLNWG
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)
SSS

GGGS


STTTGGGSTTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LTDELKKAFPEIISSLINKNIPNFKWLAGFTSGEGCFFVNLIKSKSKLGVQVQLVFSITQHIKDKNLMNS
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)

















SSSSS
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LITYLGCGYIKEKNKSEFSWLDFVVTKFSDINDKIIPVFQENTLIGVKLEDFEDWCKVAKLIEEKKHLTE
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) T

TT

TS


STTTGGGS
 .........290.........
Sequence SGLDEIKKIKLNMNKGRVF
Predicted secondary structure





SS confidence


















Known secondary structure (DSSP) TSGGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D