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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3qntA_

Fold library idPDB HeaderMoleculeTitle
c3qntA_PDB header: transport proteinChain: A: PDB Molecule: npc1 (niemann-pick disease, type c1, gene)-like 1, isoformPDBTitle: npc1l1 (ntd) structure


Added to library: Sat May 14 08:59:52 2011
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence EPYTTIHQPGYCAFYDECGKNPELSGSLMTLSNVSCLSNTPARKITGDHLILLQKICPRLYTGPNTQACC
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Known secondary structure (DSSP)

S




TTB
S

TTS
TTS







B


SGGG

SSS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence SAKQLVSLEASLSITKALLTRCPACSDNFVNLHCHNTCSPNQSLFINVTRVAQLGAGQLPAVVAYEAFYQ
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Known secondary structure (DSSP)
TTT

TTGGGT

SSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence HSFAEQSYDSCSRVRVPAAATLAVGTMCGVYGSALCNAQRWLNFQGDTGNGLAPLDITFHLLEPGQAVGS
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Known secondary structure (DSSP) TT
B
TTSS
BTTGGGSTTS
SSS

T
TTTT

SS
TTS
 .........220.........230.........240....
Sequence GIQPLNEGVARCNESQGDDVATCSCQDCAASCPA
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Known secondary structure (DSSP) S


B





TTS

TTT




TTT
GGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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