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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3qkuB_

Fold library idPDB HeaderMoleculeTitle
c3qkuB_PDB header: replicationChain: B: PDB Molecule: dna double-strand break repair rad50 atpase;PDBTitle: mre11 rad50 binding domain in complex with rad50 and amp-pnp


Added to library: Sat Apr 2 09:11:22 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKLERVTVKNFRSHSDTVVEFKEGINLIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTKVGARDTY
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Known secondary structure (DSSP)
TT

S
TTSSSS


TT

TTTTB
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence IDLIFEKDGTKYRITRRFLKGYSSGEIHAMKRLVGNEWKHVTEPSSKAISAFMEKLIPYNIFLNAIYIRQ
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Known secondary structure (DSSP)
SS
TT
SS

TT
S
SSS
TT
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GQIDAILESDEAREKVVREVLAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVWEGKERPLTF
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Known secondary structure (DSSP) T
SSTTSS


TTTSS


SS
TTGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEELKD
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Known secondary structure (DSSP) S
STTTT
S


SS

TTTSSSS
SGGGG
 .........290.........300.
Sequence AADHVIRISLENGSSKVEVVS
Predicted secondary structure

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Known secondary structure (DSSP) T
SB
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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