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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3qg5A_

Fold library idPDB HeaderMoleculeTitle
c3qg5A_PDB header: hydrolaseChain: A: PDB Molecule: rad50;PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair


Added to library: Sat Apr 23 09:17:11 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XRPERLTVRNFLGLKNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGIRYPNSYDYVNRNAVDGTA
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Known secondary structure (DSSP)
SBTT
S


SS
STTSSTS

SS
SSGGGGB
SSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RLVFQFERGGKRYEIIREINALQRKHNAKLSEILENGKKAAIAAKPTSVKQEVEKILGIEHRTFIRTVFL
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Known secondary structure (DSSP)
SSSTTTT


TTS

S

STTT

TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence PQGEIDKLLISPPSEITEIISDVFQSKETLEKLEKLLKEKXKKLENEKKLKEXSDEYNNLDLLRKYLFDK
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Known secondary structure (DSSP) T

S



T
 .........220.........230.........240.........250.........260.........270.........280
Sequence SNFSRYFTGRVLEAVLKRTKAYLDILTNGRFDIDFDDEKGGFIIKDWGIERPARGLSGGERALISISLAX
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Known secondary structure (DSSP) TTTTTT

SSSSSTT
GGGS
 .........290.........300.........310.........320.........330.........340.........
Sequence SLAEVASGRLDAFFIDEGFSSLDTENKEKIASVLKELERLNKVIVFITHDREFSEAFDRKLRITGGVVV
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Known secondary structure (DSSP)


S



GGGGGGGGG
S

ST
SSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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